Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0663 ATGGCTCCGACATTCTCTTCCCTCGCTTCGTCTTTTCAATCTCAAAAGAAACATGATGTTTTCATAAGCTTTCGAGGTGGGGACACCCGCTTCACTTTCACGAGCCATCTTCATAATGCTCTCTGCAGAAGCAAGGTAGAAACATTCATTGATGATAGGCTTGAGAAAGGAGGCGAGTTGTGGCCAAAGCTTGAGGAAGCCATTGAGGGCTCAACCCTATTCCTCGTGATACTGTCTGAAGACTACGCGTCTTCCACGTGGTGCTTGAAGGAGCTCACCAAAATACTACAGAGCACCTGCAGAGATCAGGGAAAGGGACAGCGTGTGATGCCAGTGTTCTATAAGATAGAACCTTCACATGTGAGGAAGCAGTTGGGGAAGTACGAGGAAGCATTTGCAAAATATGATCACATGTACAGCGGCAAGAAGCAACCTGCTGTAAACAAGTGGAGGGAGTCTCTCACTCAAGTTGCCAATTTTGCTGGCTGGCAATGTACCTCCAATAGGAATGAAGCTGAATTAGTTGACGAGATAGTCAGAGCTGTGATACAAAGGTTGGATTGTATGCATCAAGGTGAAGGTGATTCGAAAAACTTGGTTGGAATTCATAGGAAAATTGCAGATGTGGAATCATTGTTACACAATGGATCATCCAAAGATGTTCGCTTTGTCGGAATTCAAGGTAGGAGAGGTATTGGCAAAACAGCTCTTGCAAAAGAAGTATTTAACAAGTTGTATGTTTCATATGAAGGGTTTTGTTTCCTGGCCAACATTAAGGAAGAGTCCAAGAAACATGGAATAGCTGCTCTGAGGAAGAAACTTATGTTGACATTACTGGGGGACAAAGACTCTCACGTTGGCATGCCTGATGGAATAACTCCTTTTGCCATGAAAAGGTTGGGTCGGAAAAAAAGCCTTGTTGTTCTTGATGATATTGATGATCAAGAACAATTAGAGAATTTAGCTGGAAGGCATGATTGGTTTGGATCAGGCAGTAAAATTCTGATAACAGCAAGAAATAAACAAGTTCTTGGGAAGGAAGTAGATGATATATACGTGCTTGAAGGTTTGAATTCTGGTGAAGCTTTGTGCCTTTTCTCGCTGCATGCCTTCAAAAATGATTTTGCTGACATGGAGTTGAAAGAATTGGCAAAGAATGTGGTCTGTCACGCAAAAGGCATTCCACGAGTCCTGAAAGCTTTGGGCTGTTTTTTGTATGGAAAAAGTAAAAAAGAGTGGAAAAGGTTATTGGCTAAGCTTAAGAAAATGCTTTGCACAAAACTTTATGACGTGCTGAAGTTTAGCTCCCAAGGCCTAGATCATGAAGAGAAAAATATCTTTCTGGATATTGCACCTTTCTTCAAAGGTAGAGGTATGAAAAATAAAAAAATAAGAGTTAACAAAGCAAGAGCAATCATGCAAAATTTGATACAAGAAATTGTTGGTGAAGAAACATGGAAAGATTCTATAAAGAAAGGTGATTTATGGACTCCTCGTGAAGTTTCTCAAATATTGATGGAGGACATGGGGCCTGAAGCCATTGAATGCCTGGCATTAAATGTTCCAAAAGTCGAAGAGACGCACTTGGGTCATCAAGCATTTGGGCCAATAATGCCCAAAGTAGAATTTCTTGATTTTTCTAGCCAAACAAATCTGATTGAGCAGGTGAACAAGTTTCATTTAACCTGTGGTCTTGGTCAATTGCTGCCACACAAAGTCGTCCTTTTGCCTTGGGATGGGTATCCTTTGAAGTCATTGCGAGGAACATTCTCAGTTGAAGTTCTTGTTACAATTGAAATGTCAAATAGCAATTTGATAAAATTTGATACAAGAAATTTGTGGACTCCTCGTGAAGTTTCTCAAATATTGATGGAGGACATGGGGCCTGAAGCCATTGAATGCCTGGCATTAAATGTTCCAAAAGTTGAAGAGATGCACTTGAGCCATCAAGCATTTGGGCCAATAATGCCCAAAGTAGAATATCTTGATTTTTCTGGCCAAACAAATCTGATTGAACAGGTGAGCATGTTTCATTTAACCTGGGGTCATGATCAATTGCTGCCACACAAAGTCGTCCGTTTGCCTTGGGATGGGTATCCTTTGAAGTCATTGCGAGGAACATTCTCAGTTGAAGGTCTTGTTACAATTAAAATGTCAAATAGCAATTTGATAAAATTTGTGAAGATGAATACCAGAGTCTTGTTAATTTATGCAAGATTGACTTCTACGACTTGA 2235 0.4045 MAPTFSSLASSFQSQKKHDVFISFRGGDTRFTFTSHLHNALCRSKVETFIDDRLEKGGELWPKLEEAIEGSTLFLVILSEDYASSTWCLKELTKILQSTCRDQGKGQRVMPVFYKIEPSHVRKQLGKYEEAFAKYDHMYSGKKQPAVNKWRESLTQVANFAGWQCTSNRNEAELVDEIVRAVIQRLDCMHQGEGDSKNLVGIHRKIADVESLLHNGSSKDVRFVGIQGRRGIGKTALAKEVFNKLYVSYEGFCFLANIKEESKKHGIAALRKKLMLTLLGDKDSHVGMPDGITPFAMKRLGRKKSLVVLDDIDDQEQLENLAGRHDWFGSGSKILITARNKQVLGKEVDDIYVLEGLNSGEALCLFSLHAFKNDFADMELKELAKNVVCHAKGIPRVLKALGCFLYGKSKKEWKRLLAKLKKMLCTKLYDVLKFSSQGLDHEEKNIFLDIAPFFKGRGMKNKKIRVNKARAIMQNLIQEIVGEETWKDSIKKGDLWTPREVSQILMEDMGPEAIECLALNVPKVEETHLGHQAFGPIMPKVEFLDFSSQTNLIEQVNKFHLTCGLGQLLPHKVVLLPWDGYPLKSLRGTFSVEVLVTIEMSNSNLIKFDTRNLWTPREVSQILMEDMGPEAIECLALNVPKVEEMHLSHQAFGPIMPKVEYLDFSGQTNLIEQVSMFHLTWGHDQLLPHKVVRLPWDGYPLKSLRGTFSVEGLVTIKMSNSNLIKFVKMNTRVLLIYARLTSTT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0663 744 Coils Coil 459 479 - -
Prci13g0663 744 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 163 IPR035897 -
Prci13g0663 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 450 IPR027417 -
Prci13g0663 744 Gene3D - 356 440 IPR042197 -
Prci13g0663 744 ProSiteProfiles TIR domain profile. 16 186 IPR000157 GO:0007165
Prci13g0663 744 Gene3D - 11 187 IPR035897 -
Prci13g0663 744 Gene3D - 188 351 IPR027417 -
Prci13g0663 744 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 670 IPR044974 GO:0006952
Prci13g0663 744 Pfam TIR domain 17 202 IPR000157 GO:0007165
Prci13g0663 744 Pfam NB-ARC domain 210 425 IPR002182 GO:0043531
Prci13g0663 744 SMART till_3 17 160 IPR000157 GO:0007165
Prci13g0663 744 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 188 - -
Prci13g0663 744 PRINTS Disease resistance protein signature 223 238 - -
Prci13g0663 744 PRINTS Disease resistance protein signature 391 405 - -
Prci13g0663 744 PRINTS Disease resistance protein signature 654 670 - -
Prci13g0663 744 PRINTS Disease resistance protein signature 299 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0663 Prci-Chr13 5354982 5361206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0663 12 603 WRKY Transcription Factor Family AT4G12020 27.331 1.11e-52 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0663 - - pcin:129290952 1499.18