Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0659 ATGGGATCTTCTTCCAAGTTTTCTGGTATGAAATATGATGTCTTCATCAGCTTTAGAGGCACAGACACCCGTCATGGTTTTCTTAGCCATTTGAGAAAGGAATTGAGGCAGCAGCAAATTGATGCCTATGTGGATGATAGACGGGAAAGTGGGGATGAAATATCACCGGCACTTTTAAGTGCCATTGAAGAATTACTTATTTCATTGATCATATTTTCGAAGGGCTATGCTTCTTCAAAGTGGTGCTTAGAAGAACTTGTGCAGATTATTGAATGCATGGAGAAGCAAAAACAGATTGTAATTCCTGTTTTCTATAAAATAGATCCCTCAAATGTGAGACATCAGAAAGGGTCTTATGGAGATGATTTTGCTAATCACGGCAAATATTACAAGGAAAAGGTGCCAATTTGGATTTCAGTTCTGAATAAAGCTGCTAATTTATCTGGGTTTCACTCATCAAATTATGAGGATGAGGCTCAGCTCATAGAAGAAATCGCCAAATCTTTGTCAACAAAGTTGAATATTATGTACCGAAGTGACTTTACGGACCTTGTTGGGATTGATGAAAGAATTGCAGAATTAGAATCATTGATGGTTGAAGGATCAGAAGATGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATCGGTAAGACAACAATCGCAACCGCAATATTCGATCGATTTTGTTTTCAATATGAAGGGAATTGTTTTTTGGCAAATGTGAGAGAAGAAACTGAAAATCATGGAGTTATTTATTTGAAGAATAAAATTTTTTCTATACTGCTGAAGGAAAATGATTTACAAATTGGCACCCCATATGGAATACCCACTTATGTTAGGAGAAGGCTTCTTCGAAAAAGGGTTCTTGTAGTACTAGATGATATTAGTGATTCAGATCAACTTGAAAATATAGTGGGAGCACTTGATTGCTTTGGATCTGGAAGTAGAATCATTATAACAACTAGAGATAGACAGGTGCTGGGTAAAAGAGTTGATAAAATATATGAAGTTAAGCCAATGATGTTTGATGATGCTGTTCGGCTTTTTATGTTGCATGCCTTCCAGAATAATCAGGTAGACTTGGAGTGGAAAGAGCTGTCAGGGAAAGTGATTAGTTATGCTAAAGGCATTCCGTTAGCTTTAAAAGTCTTGGGTTCCTTTCTTTATGGCAGAAGTAAGGAAGAATGGAAAAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAAATTCAAGATGTGATAAGATTGAGTTATGATAGACTAGATTGGGAAGAGAAGAACATTTTCTTATATATTGCATGTTTCCTCAAAGGATATCAATCACAGCAAATAATAGTTCTATTGAATGCCTGTGGTTTCTCAACAATTATTGGGTTAAAGGTCCTTCAAGACAAAGCTCTTATAACTGAAGCCAAAGGAGCATGCTCAGAAAAATCAAGGATATTTATGCATGATTTAATACAAGAAATGGGTTGGGAGATTGTTCGTCAAGAATCTATTGATGATCCTGGAAAACGCAGTCGTTTGTGGGATGTTAATGATATATATCAAGTGCTAAGATATGACATGGGAACTAAAGCCACTCAAAGCATAACTCTGAACACGGCAAATATTGAAGAACTACACTTGAGTCCACAAACCTTATCGGCTATGCACAATCTAAAATTTCTCAATTTTTATAAACGTGGTTTTGGAAAGGGGAAGTTACATCTTCCTTGTGGTCTAGAATTTTTGTCCAATAAGCTCAGACTTTTACGTTGGGATGAATGTCCTTTGATGTCCTTGCCAGTAACATTTTCAGCTGAAAATCTTGTTACCTTGAAAATGAACAGTAGCATATTGAGAAAACTTTGGGATGGTGTCCAGAACTTGGTAAATTTAAGGGAGATTCTCCTTGATGAATCCAAGTACTTGATTGAGCTTCCAGATTTTTCAAGAGCTATGCTTCTTAAAAAAGTAAATCTCAGCCATTGTACAAGCTTGCGTAGTGTTCATCCATCCATTTTATCTCTTCCTAATTTGGGTCAATTAAGGCTAACAAATTGCAAAGCCCTTACCAGCCTTACATGCAGTACCCCTCTAAAATCACTTACATGGCTCTCACTCGATGGATGTTCAAGACTCAGTGAGTTTTCAGTAACCTCAGAAAAAAGGTTACAGTTGTTTCTTTCAAACACAGCCATCAACGATGAATTATGCTTATCAAGTGGATGCCTCGGCAATATTGAACAATTGAGGCTAGATGGCTGCCAAAGTCTCATAAATCTTCCTTATAATAATGCTGAATTGAGTGATCTTCGATCTCTTAATATTTCTGGCTGCAATAATTTAGCATCAAATCTGCATTTACTATTAGATGGGTTTTGTTCTGTGGAAGAGTTGTTGCTGAATGATTGCAGCAACTTATATGAACTGCCCAACAACATTAGCATCTTGTCATCATTACAGGAGCTGTCACTTTCAGGTTCGACTAACTTGCAGACAGTGCCCGCAAGCATCAAGCATCTTTCAAGGTTGCAATGTCTTAGGTTGGATGAATGTGAAAGGCTTCGGTCTCTACCAGAACTTCCACCCTCCGTTGTCAACTTGTCTGCTAGGAACTGTAGATCCCTTGAGACCCTGAAGCTAACCATTTCGGCTTCAGTCACATTAGAAGATGAAGTATGCTTTCACTTTGGAAATTGCATGAAATTGGATCAGCAATCAGTAAACGCTATTGAAGCAAAAGCTTTGCTTGAGATGGATAAATTAGTATCAGCTGTTGAAGAAAGGGTTACATGGACGATGCAGGCTCAACTTGTATATCCAGGAAGCAAAGTTCCAGAGTGGTTCATGTACAGATCAACACAGTCTTCCATAATTGTGGATCTCTCCTCCATCCCACAACCTAAGGATTGGAGTTTCATTTTCTGCGCCATTGTTTCTCACTCTGAATCCTTTTTGTACTTCGAAACAGAATGGTATTTTAGTGATGGCCAGCAGGTTTTGGATGAGAAGATGTATTACTTTTGTAAACATATCGGCACCATTCATTCAGATCATGTTTGTCTCTGGTATATCTCAGAGCTTCCTTCACAGGTGCAAAGGATAATTGAAGAAAAGGGTACAGATAATCAGAGCAGCATTAATCATCAATCAGTTGAAGTAAAATTCCTTGTGAAAACTCCTAGTCCGGTTCCACTTTTGGGTCTCAAGGGGTGTGGCTTATGCCCAACAGGTGCATCAGGATATCGAAGTTATATTCAACAAATGGAATTGGTGTTACAGTCACAACATAATTCAGTGGGAATCGGAGTTGGTTGCTCCTGTGACAAGACCAATGAGAAAGAAGTGGTTCCTAGGAAGTCTAAGGATTTTATCTTACCAGCTCCACCAACTGTGACATGGAAGAGGAAAACACAGGGCCTGAAAGATATTATCTTCTTATGA 3435 0.3831 MGSSSKFSGMKYDVFISFRGTDTRHGFLSHLRKELRQQQIDAYVDDRRESGDEISPALLSAIEELLISLIIFSKGYASSKWCLEELVQIIECMEKQKQIVIPVFYKIDPSNVRHQKGSYGDDFANHGKYYKEKVPIWISVLNKAANLSGFHSSNYEDEAQLIEEIAKSLSTKLNIMYRSDFTDLVGIDERIAELESLMVEGSEDVRVIGIWGMGGIGKTTIATAIFDRFCFQYEGNCFLANVREETENHGVIYLKNKIFSILLKENDLQIGTPYGIPTYVRRRLLRKRVLVVLDDISDSDQLENIVGALDCFGSGSRIIITTRDRQVLGKRVDKIYEVKPMMFDDAVRLFMLHAFQNNQVDLEWKELSGKVISYAKGIPLALKVLGSFLYGRSKEEWKSQLEKLNKMPHAKIQDVIRLSYDRLDWEEKNIFLYIACFLKGYQSQQIIVLLNACGFSTIIGLKVLQDKALITEAKGACSEKSRIFMHDLIQEMGWEIVRQESIDDPGKRSRLWDVNDIYQVLRYDMGTKATQSITLNTANIEELHLSPQTLSAMHNLKFLNFYKRGFGKGKLHLPCGLEFLSNKLRLLRWDECPLMSLPVTFSAENLVTLKMNSSILRKLWDGVQNLVNLREILLDESKYLIELPDFSRAMLLKKVNLSHCTSLRSVHPSILSLPNLGQLRLTNCKALTSLTCSTPLKSLTWLSLDGCSRLSEFSVTSEKRLQLFLSNTAINDELCLSSGCLGNIEQLRLDGCQSLINLPYNNAELSDLRSLNISGCNNLASNLHLLLDGFCSVEELLLNDCSNLYELPNNISILSSLQELSLSGSTNLQTVPASIKHLSRLQCLRLDECERLRSLPELPPSVVNLSARNCRSLETLKLTISASVTLEDEVCFHFGNCMKLDQQSVNAIEAKALLEMDKLVSAVEERVTWTMQAQLVYPGSKVPEWFMYRSTQSSIIVDLSSIPQPKDWSFIFCAIVSHSESFLYFETEWYFSDGQQVLDEKMYYFCKHIGTIHSDHVCLWYISELPSQVQRIIEEKGTDNQSSINHQSVEVKFLVKTPSPVPLLGLKGCGLCPTGASGYRSYIQQMELVLQSQHNSVGIGVGCSCDKTNEKEVVPRKSKDFILPAPPTVTWKRKTQGLKDIIFL 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0659 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 434 IPR027417 -
Prci13g0659 1144 Gene3D - 1 143 IPR035897 -
Prci13g0659 1144 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Prci13g0659 1144 SMART till_3 11 147 IPR000157 GO:0007165
Prci13g0659 1144 Pfam C-JID domain 937 1046 IPR045344 -
Prci13g0659 1144 SUPERFAMILY L domain-like 485 898 - -
Prci13g0659 1144 Pfam NB-ARC domain 195 410 IPR002182 GO:0043531
Prci13g0659 1144 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Prci13g0659 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 759 IPR044974 GO:0006952
Prci13g0659 1144 PRINTS Disease resistance protein signature 763 779 - -
Prci13g0659 1144 PRINTS Disease resistance protein signature 207 222 - -
Prci13g0659 1144 PRINTS Disease resistance protein signature 283 297 - -
Prci13g0659 1144 PRINTS Disease resistance protein signature 375 389 - -
Prci13g0659 1144 Pfam TIR domain 11 187 IPR000157 GO:0007165
Prci13g0659 1144 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Prci13g0659 1144 Gene3D - 157 336 IPR027417 -
Prci13g0659 1144 Gene3D Ribonuclease Inhibitor 719 912 IPR032675 -
Prci13g0659 1144 Gene3D Ribonuclease Inhibitor 527 718 IPR032675 -
Prci13g0659 1144 Gene3D - 342 424 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0659 Prci-Chr13 5257692 5263371 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0659 6 820 WRKY Transcription Factor Family AT4G12020 33.133 5.46e-106 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0659 - - pcin:129290873 2210.26