Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0657 ATGGGATCTTCTTCCAAGTTTTCTGGTATGAAATATGATGTCTTCATCAGCTTTAGAGGCACAGACACCCGTCATGGTTTTCTTAGCCATTTGAGAAAGGAATTGAGGCAGCAGCAAATTGATGCCTATGTGGATGATAGACGGGAAAGTGGGGATGAAATATCACCGGCACTTTTAAGTGCCATTGAAGAATTACTTATTTCATTGATCATATTTTCGAAGGGCTATGCTTCTTCAAAGTGGTGCTTAGAAGAACTTGTGCAGATTATTGAATGCATGGAGAAGCAAAAACAGATTGTAATTCCTGTTTTCTATAAAATAGATCCCTCAAATGTGAGACATCAGAAAGGGTCTTATGGAGATGATTTTGCTAATCACGGCAAATATTACAAGGAAAAGGTGCCAATTTGGATTTCAGTTCTGAATAAAGCTGCTAATTTATCTGGGTTTCACTCATCAAATTATGAGGATGAGGCTCAGCTCATAGAAGAAATCGCCAAATCTTTGTCAACAAAGTTGAATATTATGTACCGAAGTGACTTTACGGACCTTGTTGGGATTGATGAAAGAATTGCAGAATTAGAATCATTGATGGTTGAAGGATCAGAAGATGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATCGGTAAGACAACAATCGCAACCGCAATATTCGATCGATTTTGTTTTCAATATGAAGGGAATTGTTTTTTGGCAAATGTGAGAGAAGAAACTGAAAATCATGGAGTTATTTATTTGAAGAATAAAATTTTTTCTATACTGCTGAAGGAAAATGATTTACAAATTGGCACCCCATATGGAATACCCACTTATGTTAGGAGAAGGCTTCTTCGAAAAAGGGTTCTTGTAGTACTAGATGATATTAGTGATTCAGATCAACTTGAAAATATAGTGGGAGCACTTGATTGCTTTGGATCTGGAAGTAGAATCATTATAACAACTAGAGATAGACAGGTGCTGGGTAAAAGAGTTGATAAAATATATGAAGTTAAGCCAATGATGTTTGATGATGCTGTTCGGCTTTTTATGTTGCATGCCTTCCAGAATAATCAGGTAGACTTGGAGTGGAAAGAGCTGTCAGGGAAAGTGATTAGTTATGCTAAAGGCATTCCGTTAGCTTTAAAAGTCTTGGGTTCCTTTCTTTATGGCAGAAGTAAGGAAGAATGGAAAAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAAATTCAAGATGTGATAAGATTGAGTTATGATAGACTAGATTGGGAAGAGAAGAACATTTTCTTATATATTGCATGTTTCCTCAAAGGATATCAATCACAGCAAATAATAGTTCTATTGAATGCCTGTGGTTTCTCAACAATTATTGGGTTAAAGGTCCTTCAAGACAAAGCTCTTATAACTGAAGCCAAAGGAGCATGCTCAGAAAAATCAAGGATATTTATGCATGATTTAATACAAGAAATGGGTTGGGAGATTGTTCGTCAAGAATCTATTGATGATCCTGGAAAACGCAGTCGTTTGTGGGATGTTAATGATATATATCAAGTGCTAAGATATGACATGGTAATTAAGCATTGTATTTATTTTTGTAGAAAATATATTCCATCGTTCACCCTTGTATGCTACTTTTGCTTTCAGGGAACTAAAGCCACTCAAAGCATAACTCTGAACACGGCAAATATTGAAGAACTACACTTGAGTCCACAAACCTTATCGGCTATGCACAATCTAAAATTTCTCAATTTTTATAAACGTGGTTTTGGAAAGGGGAAGTTACATCTTCCTTGTGGTCTAGAATTTTTGTCCAATAAGCTCAGACTTTTACGTTGGGATGAATGTCCTTTGATGTCCTTGCCAGTAACATTTTCAGCTGAAAATCTTGTTACCTTGAAAATGAACAGTAGCATATTGAGAAAACTTTGGGATGGTGTCCAGAACTTGGTAAATTTAAGGGAGATTCTCCTTGATGAATCCAAGTACTTGATTGAGCTTCCAGATTTTTCAAGAGCTATGCTTCTTAAAAAAGTAAATCTCAGCCATTGTACAAGCTTGCGTAGTGTTCATCCATCCATTTTATCTCTTCCTAATTTGGGTCAATTAAGGCTAACAAATTGCAAAGCCCTTACCAGCCTTACATGCAGTACCCCTCTAAAATCACTTACATGGCTCTCACTCGATGGATGTTCAAGACTCAGTGAGTTTTCAGTAACCTCAGAAAAAAGGTTACAGTTGTTTCTTTCAAACACAGCCATCAACGATGAATTATGCTTATCAAGTGGATGCCTCGGCAATATTGAACAATTGAGGCTAGATGGCTGCCAAAGTCTCATAAATCTTCCTTATAATAATGCTGAATTGAGTGATCTTCGATCTCTTAATATTTCTGGCTGCAATAATTTAGCATCAAATCTGCATTTACTATTAGATGGGTTTTGTTCTGTGGAAGAGTTGTTGCTGAATGATTGCAGCAACTTATATGAACTGCCCAACAACATTAGCATCTTGTCATCATTACAGGAGCTGTCACTTTCAGGTTCGACTAACTTGCAGACAGTGCCCGCAAGCATCAAGCATCTTTCAAGGTTGCAATGTCTTAGGTTGGATGAATGTGAAAGGCTTCGGTCTCTACCAGAACTTCCACCCTCCGTTGTCAACTTGTCTGCTAGGAACTGTAGATCCCTTGAGACCCTGAAGCTAACCATTTCGGCTTCAGTCACATTAGAAGATGAAGTATGCTTTCACTTTGGAAATTGCATGAAATTGGATCAGCAATCAGTAAACGCTATTGAAGCAAAAGCTTTGCTTGAGATGGATAAATTAGTATCAGCTGTTGAAGAAAGGGTTACATGGACGATGCAGGCTCAACTTGTATATCCAGGAAGCAAAGTTCCAGAGTGGTTCATGTACAGATCAACACAGTCTTCCATAATTGTGGATCTCTCCTCCATCCCACAACCTAAGGATTGGAGTTTCATTTTCTGCGCCATTGTTTCTCACTCTGAATCCTTTTTGTACTTCGAAACAGAATGGTATTTTAGTGATGGCCAGCAGGTTTTGGATGAGAAGATGTATTACTTTTGTAAACATATCGGCACCATTCATTCAGATCATGTTTGTCTCTGGTATATCTCAGAGCTTCCTTCACAGGTGCAAAGGATAATTGAAGAAAAGGGTACAGATAATCAGAGCAGCATTAATCATCAATCAGTTGAAGTAAAATTCCTTGTGAAAACTCCTAGTCCGGTTCCACTTTTGGGTCTCAAGGGGTGTGGCTTATGCCCAACAGGTGCATCAGGATATCGAAGTTATATTCAACAAATGGAATTGGTGTTACAGTCACAACATAATTCAGTGGGAATCGGAGTTGGTTGCTCCTGTGACAAGACCAATGAGAAAGAAGTGGTTCCTAGGAAGTCTAAGGATTTTATCTTACCAGCTCCACCAACTGTGACATGGAAGAGGAAAACACAGGGCCTGAAAGATATTATCTTCTTATGA 3510 0.3812 MGSSSKFSGMKYDVFISFRGTDTRHGFLSHLRKELRQQQIDAYVDDRRESGDEISPALLSAIEELLISLIIFSKGYASSKWCLEELVQIIECMEKQKQIVIPVFYKIDPSNVRHQKGSYGDDFANHGKYYKEKVPIWISVLNKAANLSGFHSSNYEDEAQLIEEIAKSLSTKLNIMYRSDFTDLVGIDERIAELESLMVEGSEDVRVIGIWGMGGIGKTTIATAIFDRFCFQYEGNCFLANVREETENHGVIYLKNKIFSILLKENDLQIGTPYGIPTYVRRRLLRKRVLVVLDDISDSDQLENIVGALDCFGSGSRIIITTRDRQVLGKRVDKIYEVKPMMFDDAVRLFMLHAFQNNQVDLEWKELSGKVISYAKGIPLALKVLGSFLYGRSKEEWKSQLEKLNKMPHAKIQDVIRLSYDRLDWEEKNIFLYIACFLKGYQSQQIIVLLNACGFSTIIGLKVLQDKALITEAKGACSEKSRIFMHDLIQEMGWEIVRQESIDDPGKRSRLWDVNDIYQVLRYDMVIKHCIYFCRKYIPSFTLVCYFCFQGTKATQSITLNTANIEELHLSPQTLSAMHNLKFLNFYKRGFGKGKLHLPCGLEFLSNKLRLLRWDECPLMSLPVTFSAENLVTLKMNSSILRKLWDGVQNLVNLREILLDESKYLIELPDFSRAMLLKKVNLSHCTSLRSVHPSILSLPNLGQLRLTNCKALTSLTCSTPLKSLTWLSLDGCSRLSEFSVTSEKRLQLFLSNTAINDELCLSSGCLGNIEQLRLDGCQSLINLPYNNAELSDLRSLNISGCNNLASNLHLLLDGFCSVEELLLNDCSNLYELPNNISILSSLQELSLSGSTNLQTVPASIKHLSRLQCLRLDECERLRSLPELPPSVVNLSARNCRSLETLKLTISASVTLEDEVCFHFGNCMKLDQQSVNAIEAKALLEMDKLVSAVEERVTWTMQAQLVYPGSKVPEWFMYRSTQSSIIVDLSSIPQPKDWSFIFCAIVSHSESFLYFETEWYFSDGQQVLDEKMYYFCKHIGTIHSDHVCLWYISELPSQVQRIIEEKGTDNQSSINHQSVEVKFLVKTPSPVPLLGLKGCGLCPTGASGYRSYIQQMELVLQSQHNSVGIGVGCSCDKTNEKEVVPRKSKDFILPAPPTVTWKRKTQGLKDIIFL 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0657 1169 PRINTS Disease resistance protein signature 375 389 - -
Prci13g0657 1169 PRINTS Disease resistance protein signature 283 297 - -
Prci13g0657 1169 PRINTS Disease resistance protein signature 207 222 - -
Prci13g0657 1169 PRINTS Disease resistance protein signature 788 804 - -
Prci13g0657 1169 SUPERFAMILY L domain-like 485 923 - -
Prci13g0657 1169 Gene3D - 342 424 IPR042197 -
Prci13g0657 1169 Pfam TIR domain 11 187 IPR000157 GO:0007165
Prci13g0657 1169 SMART till_3 11 147 IPR000157 GO:0007165
Prci13g0657 1169 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Prci13g0657 1169 Gene3D - 1 143 IPR035897 -
Prci13g0657 1169 Gene3D - 158 336 IPR027417 -
Prci13g0657 1169 Pfam NB-ARC domain 195 410 IPR002182 GO:0043531
Prci13g0657 1169 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Prci13g0657 1169 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Prci13g0657 1169 Gene3D Ribonuclease Inhibitor 548 744 IPR032675 -
Prci13g0657 1169 Gene3D Ribonuclease Inhibitor 745 943 IPR032675 -
Prci13g0657 1169 Pfam C-JID domain 962 1071 IPR045344 -
Prci13g0657 1169 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 784 IPR044974 GO:0006952
Prci13g0657 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0657 Prci-Chr13 5252162 5263372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0657 6 845 WRKY Transcription Factor Family AT4G12020 32.164 3.60e-101 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0657 - - pcin:129290873 2281.52