Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0656 ATGGCGTCTTCTTCTTCCTCCGCTCCGTCATCTCGACCTGCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGTGAGGACACGCGCTTCAATTTCACCAGCCATCTTCACGATGCTCTTCGCAGAGACAAAATTGAAACATATATCGACTACAGACTAGAGAAAGGAGATGAGATATGGCCCTCTCTTGAGAAAGCCATTGAAGATTCGACTCTATTCCTTGTCATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCTTGAAGGAGCTTACCAAAATATTAGAGCGCTCCAAAAATCAAGGTCATAATTCGGTGATGCCAGTGTTCTATAGAGTAGATCCTTCAAATGTGAGGAAGCAGTCTGGGAGTTACGAGAAAGCATTCGAAGAACATGACCACAAAGGCATCAGCAAGCGGCAACTGCAAAAGTGGAGGGAGGCTCTTACTTACGCTTCCAATTTAGGCGGTTGGACTTGTAGCTTGGATAGGAAGGAAGCCGAGCTAATTAAAAAAATAGTGAAACTTGTGATGCAAAGATTGGGCTGCATGTTTGAAAGTGAAGGTCATTTAAAAGGCTTGATTGGAATTAACAAAAAAATAGAAGATGTAGAATCATTGTTGTACAAAGGTTCACAAGATGATGTTCAGTTTATTGGGATTTGGGGTATGGGTGGTATTGGCAAGACCACTCTTGCAAGGGCAATATTTGACAAATTGCGTTTTGCATATGAGGGGTTTTGCTTTTTGTCCAACGTAAGGGAAGAATCAAAGAACCTTGGAATAGATGCTTTGAAGAAAAAACTTGTTTGGACATTATTACGGGATAAAGAATCTCGCATTGGCGATGAGGAAATAACTCCTCATGCCATGTGGAGACTTAGCCAGAAAAAAATTCTCATTGTTCTTGATGATGTTGACGATCATGAACAATTAGAAAGTTTAGCTGGAAGACATGATTGGTTTCAATCTGGAAGTAAAATCTTGATAACAACCAGAGATAAGCAAGTGTTTGGTAAGGAAGTAGATGATATATATGTGCTTGAGGCTCTGAATTTTGGTGAAGCTTTTAATCTGTTCTCCATGAATGTCTTTGGAAAGGACTGTGCTGACCCCATGTTAAGAGAGCTAGCAATAAAGGTTACTCGGCATGCACATGGAAATCCACTGGCCCTAAAAGTTTTAGGCCGCTTCTTATTCAAGAAAAGTCACGAGGAATGGGAAAGTCAATTGAAAAAACTTAAAAAGTTTACTCGTCCAGAAATTCATAATGTTCTAATGTTGAGCTTCAGTGGACTTGATCATGAAGAGAGAAATATTTTTTTGCATGTCGCATGTTTCTTCAAAGGTTATGATGTTGAGGAAGTAAAAATTTTGTTAGATTCATGTGATTATTCAACATCTATTGGATTGGCAAATCTTGAAGGGAAAGCTCTTATAAATATTTCCAAAGGAAGAATATATATGCATGATTTACTACAAGAAATGGGTCGAGAAATTGTTCGTAAAGAATCAGAAGATGATCCTCAAAAACGTAGTCGATTATGGAATTCTCATGAAATTTATCAAATATTGAGTCAAAATATGGGAAGTGAAGCCATTGAAGCCTTATCTTTCAATTATTCAGAAATAAATGAGGAGATGTATTTAAGTCCTCAAGCCTTTTGCCGGATGCCTAATCTAAAATTTTTGGACTTTCAAGGCCATTTTCATCAAGGGTTCAATCATGATGGCATCGAGTTTTTGCCAAATGAACTTAGACTAGTGCGTTGGCATTGGTGTCCTTTGAATTCCTTGCCGGTAGCTAAAAATCTTGTGACAATTGAAATGTCATGGAGCAAATTAACAAAACTTTGGGATGGAGTGCAGGCTCCTGTAAATTTGCGCAAGATTAACCTCAGCTACTCATATAATTTGATCGAGCTTCCAAATTTTTCAAGGTGTATACATCTTACAGATGTAAATCTACAGGGTTGTTTTAAGTTGCAAAGTGTTAATCCATCAATTTTATCTCTCCATAGCCGTCATAGGTTATCACTTGAGGAGTGCGAATCCCTTACCAGCCTTACAAGCTCCACCCATCTAGAATCTCTTGGATACCTCTCCCTTCTGGATGCTCAAGCTTGGAAAAATTTTCAGTAA 2142 0.3842 MASSSSSAPSSRPAKKYDVFISFRGEDTRFNFTSHLHDALRRDKIETYIDYRLEKGDEIWPSLEKAIEDSTLFLVIFSENYASSTWCLKELTKILERSKNQGHNSVMPVFYRVDPSNVRKQSGSYEKAFEEHDHKGISKRQLQKWREALTYASNLGGWTCSLDRKEAELIKKIVKLVMQRLGCMFESEGHLKGLIGINKKIEDVESLLYKGSQDDVQFIGIWGMGGIGKTTLARAIFDKLRFAYEGFCFLSNVREESKNLGIDALKKKLVWTLLRDKESRIGDEEITPHAMWRLSQKKILIVLDDVDDHEQLESLAGRHDWFQSGSKILITTRDKQVFGKEVDDIYVLEALNFGEAFNLFSMNVFGKDCADPMLRELAIKVTRHAHGNPLALKVLGRFLFKKSHEEWESQLKKLKKFTRPEIHNVLMLSFSGLDHEERNIFLHVACFFKGYDVEEVKILLDSCDYSTSIGLANLEGKALINISKGRIYMHDLLQEMGREIVRKESEDDPQKRSRLWNSHEIYQILSQNMGSEAIEALSFNYSEINEEMYLSPQAFCRMPNLKFLDFQGHFHQGFNHDGIEFLPNELRLVRWHWCPLNSLPVAKNLVTIEMSWSKLTKLWDGVQAPVNLRKINLSYSYNLIELPNFSRCIHLTDVNLQGCFKLQSVNPSILSLHSRHRLSLEECESLTSLTSSTHLESLGYLSLLDAQAWKNFQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0656 713 Gene3D Ribonuclease Inhibitor 520 709 IPR032675 -
Prci13g0656 713 Gene3D - 11 185 IPR035897 -
Prci13g0656 713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 699 IPR044974 GO:0006952
Prci13g0656 713 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Prci13g0656 713 Gene3D - 189 345 IPR027417 -
Prci13g0656 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 443 IPR027417 -
Prci13g0656 713 Gene3D - 350 434 IPR042197 -
Prci13g0656 713 Pfam NB-ARC domain 199 419 IPR002182 GO:0043531
Prci13g0656 713 SUPERFAMILY L domain-like 489 705 - -
Prci13g0656 713 PRINTS Disease resistance protein signature 293 307 - -
Prci13g0656 713 PRINTS Disease resistance protein signature 218 233 - -
Prci13g0656 713 PRINTS Disease resistance protein signature 670 686 - -
Prci13g0656 713 PRINTS Disease resistance protein signature 385 399 - -
Prci13g0656 713 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Prci13g0656 713 SMART till_3 16 155 IPR000157 GO:0007165
Prci13g0656 713 Pfam TIR domain 16 196 IPR000157 GO:0007165
Prci13g0656 713 Pfam Leucine Rich Repeat 604 623 IPR011713 -
Prci13g0656 713 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0656 Prci-Chr13 5246104 5249493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0656 9 712 WRKY Transcription Factor Family AT4G12020 31.535 6.51e-91 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0656 - - pcin:129290880 1408.28