Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0654 ATGGCGTCGTCTTCTTCCTCTGCCCCATCATCTGGACCTGCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGTGAGGACACCCGCCACAATTTCACAAGCCATCTTCACAGTGCTCTTCACAGAGACCAAATTGAAACATATATAGACTACAGAATCGAGAAAGGAGATGAGGTATGGCCCTCTCTTGAGAAAGCCATTGAAGATTCCACTCTATTCCTTGTCATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCTTGAAGGAGCTTACCAAAATAATAGAGTGCTCCAAAAATCAAGGTCATAATTTAGTCATGCCAGTGTTCTATAGAGTAGATCCTTCAAATGTGAGGAAGCAGTCTGGGAGTTACGAGCAAGCATTTGAAGAACATGACCACAAAGGCGTCAGCAAGCAGCAACTGCAAAAGTGGAGGGAGGCTCTCACTTACGCTTCCAATTTAAGTGGTTGGTCTTGTAGCTTTGAAAGAAATGAAGCCGATCTAATTAAAGATATAGTGGAATGCGTGATACAAAAGATGGGATGCATGCACGAAAGCGAAGGTCATTTAAAAGGCCTGATTGGAATTCACAAGAGAATGGGAGCTGTAGAATCATTGTTGTGCAAAGGCTCGCAAGATGATGTTCGATTTGTTGGGATTTGGGGTATGGGTGGTATTGGCAAGACCACTCTTGCAAAAGCAATGTTCGACAAATTGCGTTTTTTTGCATTTGAGGGGTCTTGTTTTGTGTCCAATGTGAGGGAGAAATCAAAGAAACTTGGAATGGAAGCTTTGAAGAAAAAACTTGTTTGGACATTATTAGGGGATAAAGGATCACGCATTGTTGACGATGAAATAGCTCCTTATACCATGTGGAGACTTAGTCGGAAAAAAGTTCTCATTGTTCTTGATGATGTTGACGATCATGAACAATTAGAAAGTTTAGCTGGAGGAGATGTTTGCTTTGGATTAGGTAGTAAAATCTTGATAACAAATAGAAATAGACGAGTTTTTGATGTTTTTGGTATGGAGGAAGATAATATATATGTGCTTGAGGCTTTGGATTTTAATGAAGCTTTAAATCTGTTCTCCATCAATGTCTTTAGAAATGATTGTGCTGACCAGACATTAAGAAATCTTGCAAGAGAAGTGACTCGATATTGTGGTGGAATTCCTTTGGCCTTAAAAGTTTTAGGTTCTCTGTTTTTTAAAAAAAGACAAGAAGAATGGGAAAGTGAGCTGGAGAAACTTAAAAAGTTATCTTGTCCAAAAATTCATGATATTCTAAAGTTGAGCTTTGAAGGACTTGATTGTGAGGAGAAAGGTGTTTTTTTACATATATCATGTTTCTTCAAAGGTTATAAGATTGAGGATGTAAGAATTTTGTTAGATTCCTGTGGTTATTCAACAACTGCTGCATTGAGAAGCCTTAAAGATAAAGCTCTTTTAGATACTTCTCTCGGAGGAAGAATAGATATGCATGATTTACTACAAGAAATGGGTCATCAAATTGTTCGTGCAAAATCAAAAGATCCTCGAGACCGCAGTCATTTATGGAATTCTCATGAAATTTCTGAAATATTGAGTCAAAATAAGGGAAGTGAAACCATTGAAGCCTTATCTTTCAATAATTCAGAGATAACTGAAGAAGTGTATTTAAGTCCTCAAGCCTTTTGCCGAATGCCTAATCTAAAATTTCTTGATCTTCATGGCTATTTTGGTCAAAGGATCATGTTGAATGCTTCTAATGGCATTGAGTTTCCAAATAGACTCAAACTACTTCGTTGGGATGGTTGCCCTTTAAATTCCTTGTCGAGAATATTTACAGCTGAAAGTCTTGTCAAAATTGAAATGGCAGGGAGCAAATTGACAAAACTTTGGGATGGAGTGCAGAATCTTGCAAATTTGCGCGAGATAGACCTCGAGTATTCAGAAAATTTGATCGAGCTACCAGACTGTTCAAGATGCAGATGTCTTGCAGATGTAAATCTAGATTGGTGCTCAGAGTTGCGTAGTGTGCATCCAAGTATTTTAACTCTCGATAGCCTTCATAGGTTATCCCTTGAAGGGTGCGAGTCCCTTACCAGCCTTACAAGCTCTACCCATCTAAAATCTCTAGGATACCTCTCCCTTTTGGACTGCTCAAGACTGGAAAATTTTTCAGTAACCTCAGAAAATTGTGACTTTGAATTGAATCTATACGGAACAGCCATCAGTGATGAATTGACCTCATCCAGTGGGCATCTCAGCAAAGTGCGTAAACTACAACTCCACTTGAGTTTTTCTAGTCTTCCCTACAATTTGCTTGACCTGAGCAACCTTCGAGAGCTTGATATTGGTGGTTGCAACAAGTTAGCGCCGATTCTACATTCCATATTTGATAGGTTACGTTCTTTGGAAGTTATACACTTGCAATGTTGTAAGTTATTTGGACTGCCTGACAACATCAGCTTGCTGTCATCATTACGTGAGTTACATCTTGGTGGGACTACTGTAGAGACCTTGCCTGGAGGCATCAAACATCTTTTGAGGCTGCAATTTCTTACTGTGAATAGTTGTGCATGGCTTCTTTCTATACCAGAACTCCCTCCCTCCGTTCGAAGGTTGTTGGCCAGCAACTGCAAATCCCTTGAGACCGTACATTTAACTTCAACAATTGAAGACCAAGTAGTAGACGATGACATAAAAGTATCGAGATACCTTGACTTCCGAGGTTGCATGAAGTTGAACCGAGAATCAGTCAAAGCTATTGAAGCAAAAGTGCTACTTGAGCTGAACATAGCCACACCCATTCCTCGTGGCGTACTAATTGGCTACCCAGAAGCAGAGCTATGCAAAGTTCCAGAGTGCTTTATGTATAGGACAAATCGGTCTTCCATATCTGTGGATCTCTCTTCAATTCCACAACCTTGGGATGGCAGCTTCATCTTCTGCGCGATTGTTTTTGAATTTGTCCGCTTTTATGAAATTGAAGCCTGCTGTTATAAGGATGGTCTATGTGTTGGAGGTGGGCGTGCATCACTTGATTGTGGGTATCTATCTGGCAAGCCTTCAAAGCATGCTTTTTTTTGGAGAGGTCAAGTGGAAAGGCGAATTGAAGAAAGGATAATAGACGCTCAAAGCGGCACTTGTCATCCAACGCTCGAAATAAAATTCGAACCTACTTTAGAATATGGAGATAAAGATGAAGCATGGGAGTATGTGGAGGAATATGGGGTATGCCCAACATCCGCGCTCGAATATCAAAAATATATTCAAAAAATGAGGTTGAAATTGCAGCCACAGCCTGATTGTATAGGAATGGAGGCTGGTTGCTCCCGTTACAGCACAAGTCATTCTATCATGCATGATGAGCCCCATACATTTGGAATGGCGGCTGGTTGCTCTAGAAAGCGCAAATATTACAACTTCAAGGATCTTGAAGATTTTCAAGATTTGGATTCAACTGAAAATTAA 3459 0.3995 MASSSSSAPSSGPAKKYDVFISFRGEDTRHNFTSHLHSALHRDQIETYIDYRIEKGDEVWPSLEKAIEDSTLFLVIFSENYASSTWCLKELTKIIECSKNQGHNLVMPVFYRVDPSNVRKQSGSYEQAFEEHDHKGVSKQQLQKWREALTYASNLSGWSCSFERNEADLIKDIVECVIQKMGCMHESEGHLKGLIGIHKRMGAVESLLCKGSQDDVRFVGIWGMGGIGKTTLAKAMFDKLRFFAFEGSCFVSNVREKSKKLGMEALKKKLVWTLLGDKGSRIVDDEIAPYTMWRLSRKKVLIVLDDVDDHEQLESLAGGDVCFGLGSKILITNRNRRVFDVFGMEEDNIYVLEALDFNEALNLFSINVFRNDCADQTLRNLAREVTRYCGGIPLALKVLGSLFFKKRQEEWESELEKLKKLSCPKIHDILKLSFEGLDCEEKGVFLHISCFFKGYKIEDVRILLDSCGYSTTAALRSLKDKALLDTSLGGRIDMHDLLQEMGHQIVRAKSKDPRDRSHLWNSHEISEILSQNKGSETIEALSFNNSEITEEVYLSPQAFCRMPNLKFLDLHGYFGQRIMLNASNGIEFPNRLKLLRWDGCPLNSLSRIFTAESLVKIEMAGSKLTKLWDGVQNLANLREIDLEYSENLIELPDCSRCRCLADVNLDWCSELRSVHPSILTLDSLHRLSLEGCESLTSLTSSTHLKSLGYLSLLDCSRLENFSVTSENCDFELNLYGTAISDELTSSSGHLSKVRKLQLHLSFSSLPYNLLDLSNLRELDIGGCNKLAPILHSIFDRLRSLEVIHLQCCKLFGLPDNISLLSSLRELHLGGTTVETLPGGIKHLLRLQFLTVNSCAWLLSIPELPPSVRRLLASNCKSLETVHLTSTIEDQVVDDDIKVSRYLDFRGCMKLNRESVKAIEAKVLLELNIATPIPRGVLIGYPEAELCKVPECFMYRTNRSSISVDLSSIPQPWDGSFIFCAIVFEFVRFYEIEACCYKDGLCVGGGRASLDCGYLSGKPSKHAFFWRGQVERRIEERIIDAQSGTCHPTLEIKFEPTLEYGDKDEAWEYVEEYGVCPTSALEYQKYIQKMRLKLQPQPDCIGMEAGCSRYSTSHSIMHDEPHTFGMAAGCSRKRKYYNFKDLEDFQDLDSTEN 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0654 1152 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Prci13g0654 1152 Gene3D - 13 185 IPR035897 -
Prci13g0654 1152 Pfam Leucine Rich Repeat 614 632 IPR011713 -
Prci13g0654 1152 Pfam TIR domain 16 196 IPR000157 GO:0007165
Prci13g0654 1152 SUPERFAMILY "Winged helix" DNA-binding domain 425 529 IPR036390 -
Prci13g0654 1152 Pfam NB-ARC domain 200 420 IPR002182 GO:0043531
Prci13g0654 1152 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 724 IPR044974 GO:0006952
Prci13g0654 1152 SUPERFAMILY L domain-like 553 886 - -
Prci13g0654 1152 SMART till_3 16 155 IPR000157 GO:0007165
Prci13g0654 1152 Gene3D - 186 349 IPR027417 -
Prci13g0654 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 448 IPR027417 -
Prci13g0654 1152 Gene3D - 354 438 IPR042197 -
Prci13g0654 1152 Gene3D Ribonuclease Inhibitor 730 923 IPR032675 -
Prci13g0654 1152 Gene3D Ribonuclease Inhibitor 495 729 IPR032675 -
Prci13g0654 1152 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Prci13g0654 1152 PRINTS Disease resistance protein signature 389 403 - -
Prci13g0654 1152 PRINTS Disease resistance protein signature 294 308 - -
Prci13g0654 1152 PRINTS Disease resistance protein signature 770 786 - -
Prci13g0654 1152 PRINTS Disease resistance protein signature 218 233 - -
Prci13g0654 1152 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0654 Prci-Chr13 5222880 5228802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0654 778 922 WRKY Transcription Factor Family AT4G12020 31.507 2.35e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0654 - - pcin:129290874 2286.15