Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0653 ATGCTTCTTCAAGATCCCTCTGATGTGAGGCATCAAAAAGGGTCTTATGGAGATGCTTTTGTCAAACATGACAAATATTACGAGGAAAAGGTTCCAATCTGGAAATCAGCTTTGAATAAAGCAGCTAATTTATCTGGGTTTCATTCATCAAATTATGAGGATGAGGCTAAGCTTATAGAAGAAATCGCCAAGTGTTTGTCAACAAGGTTGAATATTATGTACCAAAGTGACTTCACAGGCCTTGTTGGAATTGATAAGCGGATTGCAGATATAGAATCGCTGATGAACCAAGGATCAGAAGATGTTCAGGTTATTGGAATTTGGGGCATGGGCGGTATCGGTAAGACAACTATCGCTACTGCTGTATTCAATCGATTTTGTTTTGACTATGAAGGATATTGCTTTTTGGCACATGTGAGAGAAGAATCAGAGAATCATGGGATCATGTATTTGAAGAATAAAATTCTTTCTATTCTACTCAAGGAAAATGATTTGCATATTGGCACACCAAATGGAATACCCCCTTATGTTAGGAGAAGGCTTCTTCGGAAGAGGGTACTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTTGAAAATTTAGTAGGAGCACTTGACTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTGCTAGCTAAAGGAGTTGATAAAGTATATGAGGTCAAGCCAATGATGTTTGATGATGCTGTTCAACTTTTTATGTCAAATGCCTTTGAGAACACACATCTAGACATGGAGTGGATTGAACTATCAAGGAAGGTGATAAGTTATGCTAAAGGAATTCCATTAGCTCTTAAAGTCTTGGGTTCTTTTCTTTACAGCAAGAGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAAATTCAGGATGTGATGAGATTGAGTTATGATAAACTAGATAGGGAGGAGAAAAACATTTTCTTGTATATTGCGTGTTTCCTCAAAGGATATAAATCACAGCAAATAATAGTTTTACTAAATGCTTGTGGTTTTTCAACAATCATTGGGTTAAAAGTCCTTCAAGACAAAGCTCTTGTAACTGAAATCAAAGGATCAAACTCAGGAGCTTCAAGAATATTTATGCATGATTTGGTACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGACCCTGGAAAACGTAGTCGATTATGGGATGCTAATGATATATATCAAGTGCTAGAACATAACATGGGGACTAAAGCCATTCAAAGCATAACTCTGAATGTGGCAAAAATTGAAGAGCTTTGCTTAACTCCTCAAGTCTTTGATGAGACGTCAGAGCTAAAATTTCTTAAATTTTCCCAAAATGATACTGATGAACAAATCCTTCGCCTTCCTCATGGCCTTGAATCTTTGCCAAATGAACTGAGATTTCTTCATTGGGATTGCTGTCCTTTAAAATCCTTGCCTTCCACATTCCGTCCAGAAAGTCTTGTTGAACTTAGCATGACTTGGAGTCGTGTGGAAAAACTTTGGGATGGAGTTCTGCGACTTGTGAATTTAAAGAAAATTGACCTCAGTAACTCCAAGTATCTAATGGAACTCCCAGATTTTTCTATGGCCAAAAACCTTGAAGAAGTAGAACTTTACAACTGTAAAAGCTTGCGTATGGTTCATCCTTCTATTTTAACCATCCACAAGCTTGTGAGTTTGAACCTATCATACTGCAAATCACTTACCAGACTTAGAAGTGATGTCCATTTAAGATCCCTGAGTAATCTTTCTCTTGGTGAATGCTCAAGGCTGAAGGAATTCTCAGTGACATCAGATAATATGAGGAACTTGAGTTTGGCAGGGACAGCTATCAATGAATTGCCTTCATCCATGAGGCTCCTCAACAACCTTGAAAAGTTAGAACTACATCGTTGTAAAAATCTTAAGAATCTCCCAAGCAAGTTAGTTAACCTGAGTTCTCTTCAAGAACTTCGAATATTTGGCTGCATGCAGCTTGATGCATCAAATTTACACTTCCTATTTGATGGCTCAAGGCTCTTGGAAACATTGTTGCTGCAAGATTGTCATAATTTATTTGAACTTCCAGACAACATCAGATTCTTATCCTCATTGCAGCATTTATCCCTAAACGAAACAGATATTGAGAGGTTGCCTGCAAGCATCAAGCATCTTCCACAACTTGAAAAACTTGACTTGAGTAATTGTAGGAGGCTTCAGTCTTTGCCTGAGCTTCCACTAACTATTAAAGAACTATACGTCACTAACTGCACTTCCCTGGAGAGAATAATGTTCTCTTCCATGGCTTCTTATCATCTGAAGGAAAAAGTACGAATCAGCACTAGATTCCAGAATTGTGTGAACTTGGATGCACATTCACTCAGAGCTGTGGGAGTAAATTGTCATGTAAACATCAAGAGATTGGCATATGAACATTTATCAACTCTAGGAAAAAGCAAGATCCTAGATGGTCCTGTTGATGTTATTTATCCAGGAAGCATTGTTCCAGAGTGGTTCAACAACAGGACAAGGCAGTCTTCAGTAACTATTGACCTTCCTTCTGCTCCACCTTCAATGTTTGTGGGTTTCATTTTTTGTGTGGTTGTCTGTAAGTTCCCATCAAATGACAAGAACCTCGTCGGATGTGACATCTACTTGGAAAGTAATGGTGAAAGGGACAGGAAAATGGGTACGTGGACAAGCATATCTGCTTGTGAATTTATGTCTGACCATGTGTGTCTGTGGTATGATGAACGATGTTGTCTGAAAGCAATTGAAGGCTTGGAATTAGATGAAACCACGAGTAAGAAAATATCATTTGAGTTCTTTGCTCAAACTGGAAATGTTTGGGAGAAGAAAAAGGATATTGTGATAAAAGAGTGCGGAGTTTGCCCCATATATGCCTCAGAGTGTAAGAAATTCATTGAGCAAATGGACTTGGAGTTGGAGTTGGAGTCAGAGCTTGAAGCAATTGAAATGGAAGTTAGTGGAAGGTTTGATGAGAAGAAAGATGAGGAGGAGGCAATTTCTTTAGGTCAAAGATCCAGTCAAAATATGTTTCCACCACTTCCAAATGGAACTTGGAAGAAAGCGACACAAGGCTTGAAAGATCTCATCAATCTGTGA 3153 0.3844 MLLQDPSDVRHQKGSYGDAFVKHDKYYEEKVPIWKSALNKAANLSGFHSSNYEDEAKLIEEIAKCLSTRLNIMYQSDFTGLVGIDKRIADIESLMNQGSEDVQVIGIWGMGGIGKTTIATAVFNRFCFDYEGYCFLAHVREESENHGIMYLKNKILSILLKENDLHIGTPNGIPPYVRRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDKQVLAKGVDKVYEVKPMMFDDAVQLFMSNAFENTHLDMEWIELSRKVISYAKGIPLALKVLGSFLYSKSKEEWESQLEKLNKMPHAKIQDVMRLSYDKLDREEKNIFLYIACFLKGYKSQQIIVLLNACGFSTIIGLKVLQDKALVTEIKGSNSGASRIFMHDLVQEMGWEIVREESIHDPGKRSRLWDANDIYQVLEHNMGTKAIQSITLNVAKIEELCLTPQVFDETSELKFLKFSQNDTDEQILRLPHGLESLPNELRFLHWDCCPLKSLPSTFRPESLVELSMTWSRVEKLWDGVLRLVNLKKIDLSNSKYLMELPDFSMAKNLEEVELYNCKSLRMVHPSILTIHKLVSLNLSYCKSLTRLRSDVHLRSLSNLSLGECSRLKEFSVTSDNMRNLSLAGTAINELPSSMRLLNNLEKLELHRCKNLKNLPSKLVNLSSLQELRIFGCMQLDASNLHFLFDGSRLLETLLLQDCHNLFELPDNIRFLSSLQHLSLNETDIERLPASIKHLPQLEKLDLSNCRRLQSLPELPLTIKELYVTNCTSLERIMFSSMASYHLKEKVRISTRFQNCVNLDAHSLRAVGVNCHVNIKRLAYEHLSTLGKSKILDGPVDVIYPGSIVPEWFNNRTRQSSVTIDLPSAPPSMFVGFIFCVVVCKFPSNDKNLVGCDIYLESNGERDRKMGTWTSISACEFMSDHVCLWYDERCCLKAIEGLELDETTSKKISFEFFAQTGNVWEKKKDIVIKECGVCPIYASECKKFIEQMDLELELESELEAIEMEVSGRFDEKKDEEEAISLGQRSSQNMFPPLPNGTWKKATQGLKDLINL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0653 1050 Gene3D - 239 321 IPR042197 -
Prci13g0653 1050 Gene3D - 68 232 IPR027417 -
Prci13g0653 1050 Pfam C-JID domain 840 979 IPR045344 -
Prci13g0653 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 331 IPR027417 -
Prci13g0653 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 663 IPR044974 GO:0006952
Prci13g0653 1050 Gene3D Ribonuclease Inhibitor 616 803 IPR032675 -
Prci13g0653 1050 Gene3D Ribonuclease Inhibitor 395 615 IPR032675 -
Prci13g0653 1050 PRINTS Disease resistance protein signature 272 286 - -
Prci13g0653 1050 PRINTS Disease resistance protein signature 732 748 - -
Prci13g0653 1050 PRINTS Disease resistance protein signature 180 194 - -
Prci13g0653 1050 PRINTS Disease resistance protein signature 104 119 - -
Prci13g0653 1050 SUPERFAMILY L domain-like 382 810 - -
Prci13g0653 1050 Pfam TIR domain 5 84 IPR000157 GO:0007165
Prci13g0653 1050 Gene3D - 2 67 IPR035897 -
Prci13g0653 1050 Pfam NB-ARC domain 91 319 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0653 Prci-Chr13 5210568 5214365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0653 23 747 WRKY Transcription Factor Family AT4G12020 34.647 2.12e-111 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0653 - - ccaj:109805840 1343.18