Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0652 ATGGCATCTTGTTCTCTTGGCATAAAGTATGATGTCTTCATCAGTTTCAGAGGCACAGACACACGCCATGGTTTTCTTAGTCATCTGAGGAAGGAAATGCGGCAGAAACAAATTGATGCCTATGTGGACGACAGGCTTGAAAGTGGAGATCAAATATCACCGGCACTCTTGAGAGCCATCAAAGATTCACTCATGGCATTGATTATATTTTCAAAGGATTATGCTTCTTCAAGGTGGTGTTTAGAAGAGCTGGTGCAGATTATTGAGTGTATGGAGAAACAAAAACAGATTGTAATTCCTGTTTTCTATAATACAGATCCCTCTGATGTGAGGCATCAAAAAGGGTCTTATGGAGATGCTTTTGTCAAACATGACAAATATTACGAGGAAAAGGTTCCAATCTGGAAATCAGCTTTGAATAAAGCAGCTAATTTATCTGGGTTTCATTCATCAAATTATGAGGATGAGGCTAAGCTTATAGAAGAAATCGCCAAGTGTTTGTCAACAAGGTTGAATATTATGTACCAAAGTGACTTCACAGGCCTTGTTGGAATTGATAAGCGGATTGCAGATATAGAATCGCTGATGAACCAAGGATCAGAAGATGTTCAGGTTATTGGAATTTGGGGCATGGGCGGTATCGGTAAGACAACTATCGCTACTGCTGTATTCAATCGATTTTGTTTTGACTATGAAGGATATTGCTTTTTGGCACATGTGAGAGAAGAATCAGAGAATCATGGGATCATGTATTTGAAGAATAAAATTCTTTCTATTCTACTCAAGGAAAATGATTTGCATATTGGCACACCAAATGGAATACCCCCTTATGTTAGGAGAAGGCTTCTTCGGAAGAGGGTACTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTTGAAAATTTAGTAGGAGCACTTGACTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTGCTAGCTAAAGGAGTTGATAAAGTATATGAGGTCAAGCCAATGATGTTTGATGATGCTGTTCAACTTTTTATGTCAAATGCCTTTGAGAACACACATCTAGACATGGAGTGGATTGAACTATCAAGGAAGGTGATAAGTTATGCTAAAGGAATTCCATTAGCTCTTAAAGTCTTGGGTTCTTTTCTTTACAGCAAGAGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAAATTCAGGATGTGATGAGATTGAGTTATGATAAACTAGATAGGGAGGAGAAAAACATTTTCTTGTATATTGCGTGTTTCCTCAAAGGATATAAATCACAGCAAATAATAGTTTTACTAAATGCTTGTGGTTTTTCAACAATCATTGGGTTAAAAGTCCTTCAAGACAAAGCTCTTGTAACTGAAATCAAAGGATCAAACTCAGGAGCTTCAAGAATATTTATGCATGATTTGGTACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGACCCTGGAAAACGTAGTCGATTATGGGATGCTAATGATATATATCAAGTGCTAGAACATAACATGGGGACTAAAGCCATTCAAAGCATAACTCTGAATGTGGCAAAAATTGAAGAGCTTTGCTTAACTCCTCAAGTCTTTGATGAGACGTCAGAGCTAAAATTTCTTAAATTTTCCCAAAATGATACTGATGAACAAATCCTTCGCCTTCCTCATGGCCTTGAATCTTTGCCAAATGAACTGAGATTTCTTCATTGGGATTGCTGTCCTTTAAAATCCTTGCCTTCCACATTCCGTCCAGAAAGTCTTGTTGAACTTAGCATGACTTGGAGTCGTGTGGAAAAACTTTGGGATGGAGTTCTGCGACTTGTGAATTTAAAGAAAATTGACCTCAGTAACTCCAAGTATCTAATGGAACTCCCAGATTTTTCTATGGCCAAAAACCTTGAAGAAGTAGAACTTTACAACTGTAAAAGCTTGCGTATGGTTCATCCTTCTATTTTAACCATCCACAAGCTTGTGAGTTTGAACCTATCATACTGCAAATCACTTACCAGACTTAGAAGTGATGTCCATTTAAGATCCCTGAGTAATCTTTCTCTTGGTGAATGCTCAAGGCTGAAGGAATTCTCAGTGACATCAGATAATATGAGGAACTTGAGTTTGGCAGGGACAGCTATCAATGAATTGCCTTCATCCATGAGGCTCCTCAACAACCTTGAAAAGTTAGAACTACATCGTTGTAAAAATCTTAAGAATCTCCCAAGCAAGTTAGTTAACCTGAGTTCTCTTCAAGAACTTCGAATATTTGGCTGCATGCAGCTTGATGCATCAAATTTACACTTCCTATTTGATGGCTCAAGGCTCTTGGAAACATTGTTGCTGCAAGATTGTCATAATTTATTTGAACTTCCAGACAACATCAGATTCTTATCCTCATTGCAGCATTTATCCCTAAACGAAACAGATATTGAGAGGTTGCCTGCAAGCATCAAGCATCTTCCACAACTTGAAAAACTTGACTTGAGTAATTGTAGGAGGCTTCAGTCTTTGCCTGAGCTTCCACTAACTATTAAAGAACTATACGTCACTAACTGCACTTCCCTGGAGAGAATAATGTTCTCTTCCATGGCTTCTTATCATCTGAAGGAAAAAGTACGAATCAGCACTAGATTCCAGAATTGTGTGAACTTGGATGCACATTCACTCAGAGCTGTGGGAGTAAATTGTCATGTAAACATCAAGAGATTGGCATATGAACATTTATCAACTCTAGGAAAAAGCAAGATCCTAGATGGTCCTGTTGATGTTATTTATCCAGGAAGCATTGTTCCAGAGTGGTTCAACAACAGGACAAGGCAGTCTTCAGTAACTATTGACCTTCCTTCTGCTCCACCTTCAATGTTTGTGGGTTTCATTTTTTGTGTGGTTGTCTGTAAGTTCCCATCAAATGACAAGAACCTCGTCGGATGTGACATCTACTTGGAAAGTAATGGTGAAAGGGACAGGAAAATGGGTACGTGGACAAGCATATCTGCTTGTGAATTTATGTCTGACCATGTGTGTCTGTGGTATGATGAACGATGTTGTCTGAAAGCAATTGAAGGCTTGGAATTAGATGAAACCACGAGTAAGAAAATATCATTTGAGTTCTTTGCTCAAACTGGAAATGTTTGGGAGAAGAAAAAGGATATTGTGATAAAAGAGTGCGGAGTTTGCCCCATATATGCCTCAGAGTGTAAGAAATTCATTGAGCAAATGGACTTGGAGTTGGAGTTGGAGTCAGAGCTTGAAGCAATTGAAATGGAAGTTAGTGGAAGGTTTGATGAGAAGAAAGATGAGGAGGAGGCAATTTCTTTAGGTCAAAGATCCAGTCAAAATATGTTTCCACCACTTCCAAATGGAACTTGGAAGAAAGCGACACAAGGCTTGAAAGATCTCATCAATCTGTGA 3456 0.3857 MASCSLGIKYDVFISFRGTDTRHGFLSHLRKEMRQKQIDAYVDDRLESGDQISPALLRAIKDSLMALIIFSKDYASSRWCLEELVQIIECMEKQKQIVIPVFYNTDPSDVRHQKGSYGDAFVKHDKYYEEKVPIWKSALNKAANLSGFHSSNYEDEAKLIEEIAKCLSTRLNIMYQSDFTGLVGIDKRIADIESLMNQGSEDVQVIGIWGMGGIGKTTIATAVFNRFCFDYEGYCFLAHVREESENHGIMYLKNKILSILLKENDLHIGTPNGIPPYVRRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDKQVLAKGVDKVYEVKPMMFDDAVQLFMSNAFENTHLDMEWIELSRKVISYAKGIPLALKVLGSFLYSKSKEEWESQLEKLNKMPHAKIQDVMRLSYDKLDREEKNIFLYIACFLKGYKSQQIIVLLNACGFSTIIGLKVLQDKALVTEIKGSNSGASRIFMHDLVQEMGWEIVREESIHDPGKRSRLWDANDIYQVLEHNMGTKAIQSITLNVAKIEELCLTPQVFDETSELKFLKFSQNDTDEQILRLPHGLESLPNELRFLHWDCCPLKSLPSTFRPESLVELSMTWSRVEKLWDGVLRLVNLKKIDLSNSKYLMELPDFSMAKNLEEVELYNCKSLRMVHPSILTIHKLVSLNLSYCKSLTRLRSDVHLRSLSNLSLGECSRLKEFSVTSDNMRNLSLAGTAINELPSSMRLLNNLEKLELHRCKNLKNLPSKLVNLSSLQELRIFGCMQLDASNLHFLFDGSRLLETLLLQDCHNLFELPDNIRFLSSLQHLSLNETDIERLPASIKHLPQLEKLDLSNCRRLQSLPELPLTIKELYVTNCTSLERIMFSSMASYHLKEKVRISTRFQNCVNLDAHSLRAVGVNCHVNIKRLAYEHLSTLGKSKILDGPVDVIYPGSIVPEWFNNRTRQSSVTIDLPSAPPSMFVGFIFCVVVCKFPSNDKNLVGCDIYLESNGERDRKMGTWTSISACEFMSDHVCLWYDERCCLKAIEGLELDETTSKKISFEFFAQTGNVWEKKKDIVIKECGVCPIYASECKKFIEQMDLELELESELEAIEMEVSGRFDEKKDEEEAISLGQRSSQNMFPPLPNGTWKKATQGLKDLINL 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0652 1151 Gene3D - 340 422 IPR042197 -
Prci13g0652 1151 Pfam NB-ARC domain 192 420 IPR002182 GO:0043531
Prci13g0652 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 763 IPR044974 GO:0006952
Prci13g0652 1151 SUPERFAMILY L domain-like 483 911 - -
Prci13g0652 1151 Gene3D Ribonuclease Inhibitor 498 716 IPR032675 -
Prci13g0652 1151 Gene3D Ribonuclease Inhibitor 717 904 IPR032675 -
Prci13g0652 1151 PRINTS Disease resistance protein signature 281 295 - -
Prci13g0652 1151 PRINTS Disease resistance protein signature 205 220 - -
Prci13g0652 1151 PRINTS Disease resistance protein signature 833 849 - -
Prci13g0652 1151 PRINTS Disease resistance protein signature 373 387 - -
Prci13g0652 1151 SMART till_3 9 145 IPR000157 GO:0007165
Prci13g0652 1151 Pfam C-JID domain 941 1080 IPR045344 -
Prci13g0652 1151 ProSiteProfiles TIR domain profile. 8 171 IPR000157 GO:0007165
Prci13g0652 1151 Pfam TIR domain 9 185 IPR000157 GO:0007165
Prci13g0652 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 432 IPR027417 -
Prci13g0652 1151 Gene3D - 169 333 IPR027417 -
Prci13g0652 1151 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 173 - -
Prci13g0652 1151 Gene3D - 7 168 IPR035897 -
Prci13g0652 1151 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 148 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0652 Prci-Chr13 5210568 5214876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0652 10 848 WRKY Transcription Factor Family AT4G12020 33.137 5.45e-119 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0652 - - ccaj:109805840 1497.26