Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0649 ATGGCGTCGTCTTCTTCCTCTGCTCCATCATCTCGACCTGCAAAGGAATATGGTGTTTTTATTAGCTTCAGAGGTGAGGACACCCGCCTCAATTTCACAAGCCATCTTCACAGTGCTCTTTGCAGAGACAAAATTACAACATTTATCGACAACGGAATCGAGAAAGGAGATGAGGTATGGCCCTCTCTTGAGAAAGCCATTGAAGATTCGACTCTATTCCTTGTGGTCTTCTCAGAAAAATATGCATCTTCCACGTGGTGCTTGAAGGAGCTTACCAAAATATTAGAGTGCTCCAAAAATCAAGGTCATAATTCGGTGATGCCAGTGTTCTATAGAGTAGATCCTGCAAATGTGAGGAAGCAGTCTGGGAGTTACGAGAAAGCATTTGAAGAACATGACCACAAAGGCATCAGCAAGCAGCAACTGCAAAAGTGGAGGGAGGCTCTCACTTACGCTTCCAATTTAGGTGGCTGGCATTGTAGCTTGGATAGAAATGAAGCCGATCTAATTAAAGAAATAGTGCAATGCGTGATACAAAAGATGGGATGCATGTATGAAAGCGAAGATCATTTAAAAGGCCTGATTGGAATTCACAAGAGAATGGAAGCTCTAGAATCATTGTTGAACAAAGGCTCCCAAGATGATGTTCGATTTGTTGGGATTTGGGGTATGGGTGGTATTGGCAAGACCACTCTTGCAAAAGCAATGTTCACCAAATTGCGTTTTTTGGCATTTGAGGGGTCTTGTTTTCTGTCCAATGTGAGAGAGGAATCAAAGAAACTTGGAAAGGAAGGTTTGAAGGAAAGGCTTGTCAGGACATTATTAAGGGATAAAGGCGATGAAATAGCTCCTTCTACCATGCAGAGACTTAGCTGGAAAAAAGTTCTCATTGTTCTTGATGATGTTGACGATCATGAACAATTAGAAAGTTTAGCTGGAAGACATAATTGGTTCGGATCAGGTAGTAAAATCTTGATAACAACTAGAGATAAGCAAGCTCTTGGTAAGGAAGTAGATGACATATATGAGCTCAAGGCTTTGAATTTTGATGAAGCTTTTAATCTGTTGTCCATGAATGCCTTTAGAAAGAACTGTGCTGACCCAATAATAAGAAAGCTAGCAACGAAAGTGACTCTATATGCAAATGGAATTCCATTGGCCCTAAAAGTTTTAGGTTCCTTCTTGTTCGACAAAAGTAAAGAAGAATGGGAAAGCCAGCTAAAAAAACTTAAAAAGTCACCTTTTTCAAAAATTCATGATATTTTGAAGTTGAGTTTCGAAGGACTTGATCGTGAGGAGAAAGATATTTTTTTATATTTGGCATGTTTCTTCAAAGATTATGATGTTAAGAATGTAAGAAATTTGTTAGATTCATGCAATTATTCAACAACTATCGCTTTGAGCCGTCTTAAAGATAAAGCTCTATTAGATATTTCTTTTGGAAAAATAGATATGCATGATTTACTACAAGAAATGGGTCAAGAAATTGTCCGTGAGGAATCAAAAGATCCTCAAAATCGCAGTCGATTATGGAATTCTGATGAAATTTCTGAAATATTGAGTCAAACTAAGGGAAGTGAAGCAATTGAAGCCTTATCTTTCAATGTGTCAGAGATAACTGAAGAGATGTATTTAAGTCCTCAAGCCTTTTCCCGAATGCCTAATCTAAAATTTCTTGATTTTTATGGCTATTTTGGTCAAATGATCAAGTTGAATACTCCTTATGACATTGAGTTCCCAAATCAAATCAGACTACTGCGTTGGTTTGAGTGCCCTTTAAATTCCTTGCCGAGAACATTCACAGCTGAAAATCTTGTCAAAATTGAAATGCCATGCAGCAAATTGACAAAACTTTGGGATGGAGTGCAGAATCTTGCAAATTTGCGCGAGATGGACCTCCAGTGTTCAAGAAATTTGATCGAGCTACCAGACTGTTCAAGATGCAAATGTCTTGCAGATGTAAATCTAGATGGCTGCTCAGAGTTGCGTAGTGTGCATCCAAGTATTTTAACTCTCGATAGCCTTCATAGGTTATCACTTGAATATTGCGAATCCCTTACCAGCCTTAGAAGCTCTACCCATCTAAAATCTCTCGGATACCTCTCCCTTCTGGACTGCTCAGGACTGGAAAATTTTTCAGTAACCTCAGACAATTGTGACTTTGAATTGAATCTATACGGAACAGCCGTCAGTGATGAATTGACCTCATCCAGTGGGCATCTCAGCAAAGTGCGTAAACTAGAACTCCACTTGAGTTTTTCTAGTCTTCCCTACAATTTGCTTGACCTGAGCAACCTTCGAGAGCTTGATATTGGTGGTTGCAACAAGTTAGCGCCGATTCTACATTCCATATTTGATAGGTTACGTTCTTTGGAAGTTATAAACTTGTCATGTTGTAGCGAGTTATTTGGACTGCCTGACAACATCAGCTTGCTGTCATCATTACGTGAGTTACATCTCTGTGCGACTACTGTAGAGACCTTGCCTGGAGGCATCAAACATCTTTTGAGGCTGCAACTTCTTAATGTGAGTAGTTGTGCATCGCTTCTTTTTATACCAGAACTCCCTCCCTCCGTTCGAAGGTTGTGTGCCTGCGACAGCAAATCCCTTGAGACCGTACATTTAACTTCAACAATTGAAGACCAAGTAGTAGAAGAGGACAAAAAAGTATCGAGATACCTTGACTTCCTAGGTTGCATGAAGTTGAATCGAGAATCAGTGAAAGCTATTGAAGCAAAAGTGCTACTTGAGCTGAACATAGCCACACCCATTCCTCGTGGCGCACTAATTCGCTACCCAGAAGCAGAGCTATGCAAAGTTCCAGAGTGCTTCATGTATAGGACAAATCAGTCTTCCATATCTGTGGGTCTCTCTTCGATTCCACAACCTTGGGATGGCAGCTTCATCTTCTGCGCGATTGTTTTTGGATTTTTCCACAACCTTCGTGAAATTGAAGCCTGCTGTTATAATGATGGTCCATGTGTTGGAGGTGGGCGTGCATCATTTGATTGTGGGTATCTATACGCCAAGCGTTCAAAGCATGTTTTTTTTTGGAGAGGTCAAGTAGAAAGGCGAATTGAAGAAAGGATAATAGATGCTCAAAGCAGCGCTTGTCATCGAACGCTCGAAATAAAATTCGAACCTAATTTTGAATATGGAGATAAAGCATCGGAGTATGTGGAGGAATATGGGGTGTGCCCAACATCGGCACCCGAATATCAAAATTATATTCAACAAATGAGGTTGGAATTGCAGCCACAGCCTGATTGTATAGGAATGGAGGCTGGTTGCTCCCGTTACAGCACAAGTCATTCTACCATGCATGATGAGCCCCATACATTTGGAATGGCGGCTGGTTGCTCTAGAAAGCGCAAATATTACAACTTCATGGATCTTGAAGATTTTCAAGATTTGGATTCAACTGAAAATTAA 3432 0.403 MASSSSSAPSSRPAKEYGVFISFRGEDTRLNFTSHLHSALCRDKITTFIDNGIEKGDEVWPSLEKAIEDSTLFLVVFSEKYASSTWCLKELTKILECSKNQGHNSVMPVFYRVDPANVRKQSGSYEKAFEEHDHKGISKQQLQKWREALTYASNLGGWHCSLDRNEADLIKEIVQCVIQKMGCMYESEDHLKGLIGIHKRMEALESLLNKGSQDDVRFVGIWGMGGIGKTTLAKAMFTKLRFLAFEGSCFLSNVREESKKLGKEGLKERLVRTLLRDKGDEIAPSTMQRLSWKKVLIVLDDVDDHEQLESLAGRHNWFGSGSKILITTRDKQALGKEVDDIYELKALNFDEAFNLLSMNAFRKNCADPIIRKLATKVTLYANGIPLALKVLGSFLFDKSKEEWESQLKKLKKSPFSKIHDILKLSFEGLDREEKDIFLYLACFFKDYDVKNVRNLLDSCNYSTTIALSRLKDKALLDISFGKIDMHDLLQEMGQEIVREESKDPQNRSRLWNSDEISEILSQTKGSEAIEALSFNVSEITEEMYLSPQAFSRMPNLKFLDFYGYFGQMIKLNTPYDIEFPNQIRLLRWFECPLNSLPRTFTAENLVKIEMPCSKLTKLWDGVQNLANLREMDLQCSRNLIELPDCSRCKCLADVNLDGCSELRSVHPSILTLDSLHRLSLEYCESLTSLRSSTHLKSLGYLSLLDCSGLENFSVTSDNCDFELNLYGTAVSDELTSSSGHLSKVRKLELHLSFSSLPYNLLDLSNLRELDIGGCNKLAPILHSIFDRLRSLEVINLSCCSELFGLPDNISLLSSLRELHLCATTVETLPGGIKHLLRLQLLNVSSCASLLFIPELPPSVRRLCACDSKSLETVHLTSTIEDQVVEEDKKVSRYLDFLGCMKLNRESVKAIEAKVLLELNIATPIPRGALIRYPEAELCKVPECFMYRTNQSSISVGLSSIPQPWDGSFIFCAIVFGFFHNLREIEACCYNDGPCVGGGRASFDCGYLYAKRSKHVFFWRGQVERRIEERIIDAQSSACHRTLEIKFEPNFEYGDKASEYVEEYGVCPTSAPEYQNYIQQMRLELQPQPDCIGMEAGCSRYSTSHSTMHDEPHTFGMAAGCSRKRKYYNFMDLEDFQDLDSTEN 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0649 1143 Gene3D - 186 340 IPR027417 -
Prci13g0649 1143 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Prci13g0649 1143 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Prci13g0649 1143 Gene3D - 346 430 IPR042197 -
Prci13g0649 1143 Gene3D - 14 185 IPR035897 -
Prci13g0649 1143 Pfam NB-ARC domain 200 420 IPR002182 GO:0043531
Prci13g0649 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 440 IPR027417 -
Prci13g0649 1143 Gene3D Ribonuclease Inhibitor 721 909 IPR032675 -
Prci13g0649 1143 Gene3D Ribonuclease Inhibitor 484 720 IPR032675 -
Prci13g0649 1143 PRINTS Disease resistance protein signature 218 233 - -
Prci13g0649 1143 PRINTS Disease resistance protein signature 381 395 - -
Prci13g0649 1143 PRINTS Disease resistance protein signature 761 777 - -
Prci13g0649 1143 PRINTS Disease resistance protein signature 289 303 - -
Prci13g0649 1143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 715 IPR044974 GO:0006952
Prci13g0649 1143 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Prci13g0649 1143 SUPERFAMILY L domain-like 485 874 - -
Prci13g0649 1143 Pfam Leucine Rich Repeat 604 623 IPR011713 -
Prci13g0649 1143 Pfam TIR domain 17 196 IPR000157 GO:0007165
Prci13g0649 1143 SMART till_3 16 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0649 Prci-Chr13 5184346 5192847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0649 9 845 WRKY Transcription Factor Family AT4G12020 31.702 7.72e-99 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0649 - - pcin:129290874 1836.62