Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0647 ATGGCTGAGTCAGCAAAGACCAGCAATGGTGATGTCCTGATAGATGGGGAGCAAAACCTAATAAATGAAAATGAGATGTTGGAGGTAGAGCATGTTTTAGGACTTGAAAATGGAATAGACGAAATACAGGAGTCTCTGTTGCCATCTTCCCTTCAGCAATTTCTTCTGTGGCCTCCAGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTCAGCCTTGAGCAGGCTTCGCGGAAGATGTTGCCATCTGAGGTCTGCCATGTCATACCATCGATTTTGGTAGATAAATTAACTGACACTGCTCACAGTATACTATCTGAAGAACCAAACTGTGTGGAGATCAACTGTCAAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATCTACTGTTTCTTTTTAAGCATATTGGAATGCCTTCTGAGAGCCAGTTCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGCATGGAGGTTTTTTTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTCAAGAAGGAGTTGCGGACGAAATTTGGTGACCAAGGTGAAGATGTATATAATAGATGCCTACAATGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTACTCACGGAGGGCTTTTTCGGAGTATAAAAGCTGCTCCTCTGCGAAAGCCAAAGCGAAAGAAGACACAAAGAGTGGATCTTGGATCTTTAACTGAGTTATCTGAAGTTAAAAGATCCACTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGACATTCTTTGGTCAAAACCATCTAAAAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTGGGTCTATGGTGGGGTCCTGATTGCACTGAGACTTTTTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGGCCCGATGCAAGGGTTGGTCGGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGACAATCAGGAAAACTATATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAACGAAGGAGCATATGCAATATTGAAATCGCCTGATTTTGAATGTCCTAGCTTTCACTCATTTAAATCTGCAGAAAGACCAAAGGTGGATCCTTATATTGATTACGATGCTGATGAAATGGACTTTAGCAAACTAGACTCTCCGCCAATGAATGCACAGGCCTCAGCCCCTGGTATTTCAGCTTCTCAAAGATCATATCCAGCAGGCGTGACACCAGAGTTTGACTTTGGGGCATTGGGCATTTATAATGCCCCTTCTTGGACTGTTCAGCTTCCTGATGGTTCAGGTGGCACCCAAGTTGTGCAGATTCCAAGGGCTCCTTTGGCGGAAGGACTTCCTCTTCCTCAAAACATACAGGAACCTCATAAGGCTGCTTATGAGTATTTGTTTGAGCTCATTGCTTCCTTAAAACTTATGCTTATGACCAGGGAGCCTGATAACCAGGCAAGTCAGACAGCTTTGCGAAGTAGAGCTAGGAAACGAAAAGGAGGAAGCGGTAATTAA 1665 0.4264 MAESAKTSNGDVLIDGEQNLINENEMLEVEHVLGLENGIDEIQESLLPSSLQQFLLWPPDDCITLEWVQDMMFSLEQASRKMLPSEVCHVIPSILVDKLTDTAHSILSEEPNCVEINCQEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQFYVFNGNYVDKGAWGMEVFLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKELRTKFGDQGEDVYNRCLQCFKELPLASVIGGCVYTTHGGLFRSIKAAPLRKPKRKKTQRVDLGSLTELSEVKRSTVDCPYEGPNILLSDILWSKPSKKDGLRDNTGRKLGLWWGPDCTETFLKQNKLKLIIRSHEGPDARVGRDDFGDMLCGYSLDHDGQSGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFECPSFHSFKSAERPKVDPYIDYDADEMDFSKLDSPPMNAQASAPGISASQRSYPAGVTPEFDFGALGIYNAPSWTVQLPDGSGGTQVVQIPRAPLAEGLPLPQNIQEPHKAAYEYLFELIASLKLMLMTREPDNQASQTALRSRARKRKGGSGN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0647 554 PRINTS Serine/threonine phosphatase family signature 368 384 IPR006186 GO:0016787
Prci13g0647 554 PRINTS Serine/threonine phosphatase family signature 153 180 IPR006186 GO:0016787
Prci13g0647 554 PRINTS Serine/threonine phosphatase family signature 123 150 IPR006186 GO:0016787
Prci13g0647 554 PRINTS Serine/threonine phosphatase family signature 223 249 IPR006186 GO:0016787
Prci13g0647 554 PRINTS Serine/threonine phosphatase family signature 186 210 IPR006186 GO:0016787
Prci13g0647 554 SMART pp2a_7 91 412 IPR006186 GO:0016787
Prci13g0647 554 ProSitePatterns Serine/threonine specific protein phosphatases signature. 187 192 IPR006186 GO:0016787
Prci13g0647 554 Gene3D - 60 439 IPR029052 -
Prci13g0647 554 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 53 542 - -
Prci13g0647 554 Pfam Calcineurin-like phosphoesterase 123 342 IPR004843 GO:0016787
Prci13g0647 554 MobiDBLite consensus disorder prediction 532 554 - -
Prci13g0647 554 SUPERFAMILY Metallo-dependent phosphatases 86 418 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0647 Prci-Chr13 5152994 5158011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0647 55 334 Calmodulin-binding Proteins AT5G63870 52.921 4.10e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0647 K04460 - gmx:100779241 862.833