Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0645 ATGGACCTGGAGAGAGAGAGAATTAAAAGTGGATGTCAGAAGATCCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTACATTCCTTGGTGATGATGAGAGAAATAGCCCGTGGGGTTGTTGATGATCGAGAGAGAAAGGTGACGAAGAATGACGTGATTAGTGCTTTGCGCAACAGTATTGAGAAAATGGTGTCTGCATCCAGGGATATTATTGAAGTAATAAGCAGGATGTCGTTTGAAGGATTAGATGACCAAAGAATGCGTTTAGTATTGAGGATGAAAGAAATTGCACATGGGGTTGCTGATAAACAAGCAAGAGTTGCAGTAACTAGGCATGACATACTTGCAGAACAAGTTGGAGTTGGTTATGAAGGGATAGGATATAGTCCCATGGCTGAGTCAGCAAAGACCAGCAATGGTGATGTCCTGATAGATGGGGAGCAAAACCTAATAAATGAAAATGAGATGTTGGAGGTAGAGCATGTTTTAGGACTTGAAAATGGAATAGACGAAATACAGGAGTCTCTGTTGCCATCTTCCCTTCAGCAATTTCTTCTGTGGCCTCCAGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTCAGCCTTGAGCAGGCTTCGCGGAAGATGTTGCCATCTGAGGTCTGCCATGTCATACCATCGATTTTGGTAGATAAATTAACTGACACTGCTCACAGTATACTATCTGAAGAACCAAACTGTGTGGAGATCAACTGTCAAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATCTACTGTTTCTTTTTAAGCATATTGGAATGCCTTCTGAGAGCCAGTTCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGCATGGAGGTTTTTTTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTCAAGAAGGAGTTGCGGACGAAATTTGGTGACCAAGGTGAAGATGTATATAATAGATGCCTACAATGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTACTCACGGAGGGCTTTTTCGGAGTATAAAAGCTGCTCCTCTGCGAAAGCCAAAGCGAAAGAAGACACAAAGAGTGGATCTTGGATCTTTAACTGAGTTATCTGAAGTTAAAAGATCCACTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGACATTCTTTGGTCAAAACCATCTAAAAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTGGGTCTATGGTGGGGTCCTGATTGCACTGAGACTTTTTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGGCCCGATGCAAGGGTTGGTCGGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGACAATCAGGAAAACTATATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAACGAAGGAGCATATGCAATATTGAAATCGCCTGATTTTGAATGTCCTAGCTTTCACTCATTTAAATCTGCAGAAAGACCAAAGGTGGATCCTTATATTGATTACGATGCTGATGAAATGGACTTTAGCAAACTAGACTCTCCGCCAATGAATGCACAGGCCTCAGCCCCTGGTATTTCAGCTTCTCAAAGATCATATCCAGCAGGCGTGACACCAGAGTTTGACTTTGGGGCATTGGGCATTTATAATGCCCCTTCTTGGACTGTTCAGCTTCCTGATGGTTCAGGTGGCACCCAAGTTGTGCAGATTCCAAGGGCTCCTTTGGCGGAAGGACTTCCTCTTCCTCAAAACATACAGGAACCTCATAAGGCTGCTTATGAGTATTTGTTTGAGCTCATTGCTTCCTTAAAACTTATGCTTATGACCAGGGAGCCTGATAACCAGGCAAGTCAGACAGCTTTGCGAAGTAGAGCTAGGAAACGAAAAGGAGGAAGCGGTAATTAA 2073 0.4231 MDLERERIKSGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRERKVTKNDVISALRNSIEKMVSASRDIIEVISRMSFEGLDDQRMRLVLRMKEIAHGVADKQARVAVTRHDILAEQVGVGYEGIGYSPMAESAKTSNGDVLIDGEQNLINENEMLEVEHVLGLENGIDEIQESLLPSSLQQFLLWPPDDCITLEWVQDMMFSLEQASRKMLPSEVCHVIPSILVDKLTDTAHSILSEEPNCVEINCQEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQFYVFNGNYVDKGAWGMEVFLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKELRTKFGDQGEDVYNRCLQCFKELPLASVIGGCVYTTHGGLFRSIKAAPLRKPKRKKTQRVDLGSLTELSEVKRSTVDCPYEGPNILLSDILWSKPSKKDGLRDNTGRKLGLWWGPDCTETFLKQNKLKLIIRSHEGPDARVGRDDFGDMLCGYSLDHDGQSGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFECPSFHSFKSAERPKVDPYIDYDADEMDFSKLDSPPMNAQASAPGISASQRSYPAGVTPEFDFGALGIYNAPSWTVQLPDGSGGTQVVQIPRAPLAEGLPLPQNIQEPHKAAYEYLFELIASLKLMLMTREPDNQASQTALRSRARKRKGGSGN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0645 690 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Prci13g0645 690 Gene3D - 196 574 IPR029052 -
Prci13g0645 690 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 678 - -
Prci13g0645 690 SMART pp2a_7 227 548 IPR006186 GO:0016787
Prci13g0645 690 MobiDBLite consensus disorder prediction 668 690 - -
Prci13g0645 690 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Prci13g0645 690 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Prci13g0645 690 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Prci13g0645 690 PRINTS Serine/threonine phosphatase family signature 504 520 IPR006186 GO:0016787
Prci13g0645 690 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Prci13g0645 690 Pfam Calcineurin-like phosphoesterase 259 478 IPR004843 GO:0016787
Prci13g0645 690 SUPERFAMILY Metallo-dependent phosphatases 222 554 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0645 Prci-Chr13 5152994 5159081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0645 180 470 Calmodulin-binding Proteins AT5G63870 51.987 2.66e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0645 K04460 - qsa:O6P43_002566 947.192