Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0640 ATGGGAGGTTCCGGAAAGTGGTTGAAATCACTCATTTCTTCGAAAAAGTCCTCCCCAAATGATCGAGAAAAGACAGGTTCTGAGAAGAGCAAGAAGAAATGGAGGCTATGGAGGAATACTGCTGAAGGGATGGGATCATCCACGAGAGGCATGACGAAGAAGAGAAACGAGGTAGTGTCAGACAAGTCGGACACTGTGTCGAAAGATGCATTTACTGCCGCCGTGGCTGCTGTGGTCCGGGCTCCACCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGTATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCATTAAGGGCCTTAAGGGCAGTGGTGAGGATTCAAGCTATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTCGTCAGAGTTCAGGCCCGCGTGAAAGCAAGGAGTGTGAGCTTGTCTCCAGACAGGAAACACACTCAAGGTAATGCTCTTAAGCAAGCTGAGAGAGGATGGTGTGACATTCCAGGAAGTGTTGATGAAGTCAAAGCAAAGCTACAAATCAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTCTCTACACAGCAATCCAAAATGAGTGCTAGCCCAAACTCAAGATTCAAGCCAATGTCTCCACTCAAGCATGACAATCTTGACAGTAGGAGCTTGTTAGAGCGGTGGATGGCAACCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCTCCGGACAGGACTCCATTGTCAAGGAAAAGTGATAACTTTCTTCTCCCCAGAGCAAGAAAGAATGCTGTTACAACCAGGGTTTCACTAAAACCTCCTGTAACCAGCCTATCAGCTCCATCATCATTGTCGTCGTCTTCTGCTATAAGTTCGGAATGCATGTATGATGAGAGCCCTCTATCAGCTTCATGCACATCACCCGAGGAAAAGAGCGTTCCTAAACCGAGCTTCATGAATTTCACTGAGTCAACTAAGGCAAAACAGAAAACATGCAAGTGTTCCTCTCTGATTGGAGATGCCAGAAGCACTTCTGGTTGTGATCCTTCAGTTAATTTTTGGAGAGACTGTTATGCAACGCCTCAAAGGGCAAGCTATCAGAGAAGATACTCCAGGAGATGA 1179 0.4716 MGGSGKWLKSLISSKKSSPNDREKTGSEKSKKKWRLWRNTAEGMGSSTRGMTKKRNEVVSDKSDTVSKDAFTAAVAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQGNALKQAERGWCDIPGSVDEVKAKLQIRQEAAIKRERAMAYSLSTQQSKMSASPNSRFKPMSPLKHDNLDSRSLLERWMATKPWENRLKSERYFDSPDRTPLSRKSDNFLLPRARKNAVTTRVSLKPPVTSLSAPSSLSSSSAISSECMYDESPLSASCTSPEEKSVPKPSFMNFTESTKAKQKTCKCSSLIGDARSTSGCDPSVNFWRDCYATPQRASYQRRYSRR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0640 392 Gene3D - 90 142 - -
Prci13g0640 392 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Prci13g0640 392 MobiDBLite consensus disorder prediction 16 38 - -
Prci13g0640 392 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Prci13g0640 392 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Prci13g0640 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 133 IPR027417 -
Prci13g0640 392 SMART iq_5 90 112 IPR000048 GO:0005515
Prci13g0640 392 SMART iq_5 113 134 IPR000048 GO:0005515
Prci13g0640 392 MobiDBLite consensus disorder prediction 1 61 - -
Prci13g0640 392 MobiDBLite consensus disorder prediction 209 230 - -
Prci13g0640 392 MobiDBLite consensus disorder prediction 209 223 - -
Prci13g0640 392 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Prci13g0640 392 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0640 Prci-Chr13 5120066 5123242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0640 1 381 IQD Protein Family AT1G72670 46.062 2.46e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0640 - - ahf:112710157 362.073