Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0631 ATGGCTCGTGGGAGAATAAGGGCAAGGATAAGGCGGAGCAACCTTTACACATTTGCTTGCCTTCGACCCAGAACCACCGAGGACGGTGCCCATTCCCTTGAAGGCCCTGGGTTCTCGCGAACTGTTCATTGCAACCAGCCTCATCTCCATGAAAAGAAACCTCTACATTACTGCAAGAATAATATATCAACTACAAAATATAACGTTATCTCGTTTTTGCCCAAGGCTCTCTTTGAGCAATTTCGACGAGTTGCCAATATATATTTTCTTTTGGCTGCATGCCTCTCAGCCTCTCCAATTTCACCTTTCACACCAGTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAGGCACTGGAAGATTGGCGGAGGTTTCTTCAGGATGTCAAGGTTAATCGTCGGAAGGTCAGTGTCCATAAAGGCAATGGTGTTTTTGATTTGACGGCATGGCAGAAGATAAGGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAATTTTTCCCTGCCGACTTGCTTCTGTTGTCATCAAGTTATGATGATGGTATATGCTATGTGGAAACTATGAATTTAGACGGTGAAACGAACTTGAAAGTGAAGAGATCTTTGGAGGTTACCTTGCCTCTTGATAATGATGATGCTTTTAAGGATTTTAGAGGAACAATACAATGTGAAGACCCAAATCCCAATCTTTACACATTTGTTGGTAACATTGATCATGAACGTCAGGTTTATCCTATCGATCCTGTCCAAATTCTCCTCCGAGATTCAAAGCTGAGAAACACTGATCATGTCTATGGGGTTGTCATTTTCACCGGTCATGACAGCAAAGTGATGCAGAATTCTACCAGTTCCCCTTCAAAAAGGAGCAGAATAGAAAAGAAGATGGATTATATCATATATCTTCTTTTCACCGTCCTTATTTTAATATCTATGATAAGTTCTATAGGATTTGCTATAAAAACCAAGTTTCAAACCCCAGACTGGTGGTACTTACAGCCCATGGAAGCCGAGTACCAGTATAATCCCAACAATGCTACCTTGGCTGGGATGAGCCATCTTATAACTGCACTCATTCTTTATGGATATTTGATACCCATATCACTCTATGTGTCAATTGAACTTGTGAAGGTTCTACAAGCAAGCTTCATCAACAAAGACTTACAGATGTTTGATGAAGAAACTGGGACACCAGCTGATGCACGAACGTCAAATTTGAACGAAGAGCTGGGTCAGGTAGACACTATCCTTTCTGACAAAACTGGCACTTTAACCTGCAACCAGATGGATTTTTTGAAATGCTCCATTGCTGGTATGGCGTATGGAGTGCACTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATTTTGAGGAACAGGAGCCAGATCTCTCTAATTTCCCCCTGCCTAAGAATAAAGCACGAGGTTTGTCTGAAACTAATAGAATAGGTGGTGAAGAAATTGAAATGGAGCCCGTTGTTACTTCTAAGAGTGATGAGAGTAAAAGGCCTTCCATAAAGGGATTTAATTTTGAAGACAGCAGGATCATGAACTGCAACTGGTTGAAAGAGGCCAATTCTGATGTTCACTTGTTGTTTTTCCGAATATTAGCAGTTTGCCATACTGCCATTCCTGAGATGAATGAGGAGACTGGCAGTTTTACATATGAAGCTGAGTCACCAGATGAGGGGGCTTTTCTTGCAGCAGCCAGAGAATTTGGTTTTGAATTTTGTAAAAGGAATCAGTCTAGTATTTTCATCCGTGAAAGACTGTCTCCCTCTGGACAACCAGTTGAAAGGGAGTACAAAATCCTGAATTTATTGGACTTCACTAGTAAAAGAAAACGAATGTCTGTGGTTGTACGTGATGAGGATGGCAACATTCTTCTTATGTGCAAGGGTGCAGACAGTATCATATTTGATCGTTTGTCAAAGAATGGAAAAACATTTCTGGACGCTACTACCAGACATATAAATGAATACGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAGCTTGATGAGCAAGAGCACTCTGCTTGGAATACTGAATTCCAGAAAGCCAAAGCTGCTGTTGGGTCTGACAGAGAGGAAACTCTTGAACGATTATCAGATATAATTGAGAGAGAGTTGATTCTTGTCGGAGCTACTGCTGTTGAAGACAAACTGCAGAAAGGAGTGCCCCAATGCATTGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACTGGAGATAAGATGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATATGTATAACTACTGTGAACTCAGATTCATTAACCAACGGTGGAAAAGAGATCATCAAGGAGAACATTTTGAACCAAATCACCAATGCCTCACAAATGATCAAACTGGAGAAAGATCCCCATGCTGCATTTGCATTAATTATAGATGGTAAAACTCTGACATACACATTAGAAGATGATATGAAGCACCACTTTTTGGGATTGGCAGTAGAATGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTGGTGAAGGAAGGAACTGGGAAGACCACCCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCGGTGATGGCCAGCGACTTTGCCATTGCCCAATTTAGGTTTTTGGAGCGTCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCCTGACCATATTCTATTTTGAGGCCTTTACCGGTTTCTCTGGGCAGTCAGTTTATGATGACTGGTACATGTTATCGTTCAACGTTGTTCTTACGTCTTTACCTGTCATCTCCCTCGGGGTTTTTGAGCAAGATGTTTCATCAGAAGTTTGCTTGCAGTTTCCCGCACTTTACCAGCAAGGACCCAAAAACCTGTTTTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTTTATTCCTCTCTCATCATCTTCTTCCTTAACGTCATCATCTTCTATGACCAAGCGTTCCGTGCCAATGGCCAGACTGCTGACATGGCTGCTGTAGGCACCACAATGTTCACTTGCATCATTTGGGCTGTAAATCTTCAGATTGCTCTGACAATGAATCACTTTACCTGGATCCAACACCTACTGGTCTGGGGCAGTGTAACCACATGGTACCTATTTCTCTTGCTGTATGGCATGATTTCTCCGTACTATTCCAAGAATGCCTACCAAATACTTGTTGAAGCTCTTGGTCCTGCACCTCTTTACTGGATAGCAACCATTTTAGTAACAGTCACCTGCAATCTTCCTTATCTTACCCACATATCCTTCCAAAGATGTTTTAATCCGATGGACCATCACATCATCCAAGAAATTAAGTACTACAAGAAGGACGTTGAAGATCAAAACATGTGGACTAGGGAAAGGTCTAAGGCCAGACAGGAGACAAAGATTGGTTTCACAGCAAGAGTGGAAGCCAAGATCAGGCAATTGAAGGGAAGGCTGCAGAAGAAGCAATCGGCCATAGGTGCCTTGTCACCATCAAGAAACTTATAA 3687 0.422 MARGRIRARIRRSNLYTFACLRPRTTEDGAHSLEGPGFSRTVHCNQPHLHEKKPLHYCKNNISTTKYNVISFLPKALFEQFRRVANIYFLLAACLSASPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNRRKVSVHKGNGVFDLTAWQKIRVGDVVKVEKDQFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDNDDAFKDFRGTIQCEDPNPNLYTFVGNIDHERQVYPIDPVQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTSSPSKRSRIEKKMDYIIYLLFTVLILISMISSIGFAIKTKFQTPDWWYLQPMEAEYQYNPNNATLAGMSHLITALILYGYLIPISLYVSIELVKVLQASFINKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGMAYGVHSSEVELAAAKQMASDFEEQEPDLSNFPLPKNKARGLSETNRIGGEEIEMEPVVTSKSDESKRPSIKGFNFEDSRIMNCNWLKEANSDVHLLFFRILAVCHTAIPEMNEETGSFTYEAESPDEGAFLAAAREFGFEFCKRNQSSIFIRERLSPSGQPVEREYKILNLLDFTSKRKRMSVVVRDEDGNILLMCKGADSIIFDRLSKNGKTFLDATTRHINEYGESGLRTLALAYRKLDEQEHSAWNTEFQKAKAAVGSDREETLERLSDIIERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTVNSDSLTNGGKEIIKENILNQITNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMLSFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRANGQTADMAAVGTTMFTCIIWAVNLQIALTMNHFTWIQHLLVWGSVTTWYLFLLLYGMISPYYSKNAYQILVEALGPAPLYWIATILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDVEDQNMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSAIGALSPSRNL 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0631 1228 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Prci13g0631 1228 Gene3D - 419 433 IPR023214 -
Prci13g0631 1228 Pfam Cation transport ATPase (P-type) 547 652 - -
Prci13g0631 1228 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1151 IPR023298 -
Prci13g0631 1228 FunFam Phospholipid-transporting ATPase 592 723 - -
Prci13g0631 1228 Coils Coil 1198 1218 - -
Prci13g0631 1228 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Prci13g0631 1228 SFLD p-type atpase 405 933 IPR044492 -
Prci13g0631 1228 NCBIfam HAD-IC family P-type ATPase 854 963 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g0631 1228 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Prci13g0631 1228 CDD P-type_ATPase_APLT_Dnf-like 60 1041 - -
Prci13g0631 1228 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 1184 - -
Prci13g0631 1228 FunFam Phospholipid-transporting ATPase 725 922 - -
Prci13g0631 1228 SUPERFAMILY HAD-like 410 926 IPR036412 -
Prci13g0631 1228 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1160 IPR032630 -
Prci13g0631 1228 NCBIfam phospholipid-translocating P-type ATPase 57 1168 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci13g0631 1228 SFLD Haloacid Dehalogenase 405 933 - -
Prci13g0631 1228 Gene3D - 434 470 IPR023299 GO:0000166
Prci13g0631 1228 Gene3D - 564 699 IPR023299 GO:0000166
Prci13g0631 1228 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Prci13g0631 1228 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Prci13g0631 1228 Gene3D - 721 922 IPR023214 -
Prci13g0631 1228 FunFam Phospholipid-transporting ATPase 118 288 - -
Prci13g0631 1228 Gene3D - 118 290 - -
Prci13g0631 1228 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 524 689 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0631 Prci-Chr13 5052080 5059586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0631 1 1223 Primary Pumps ATPases AT1G17500 75.163 0.0 1941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0631 K01530 - gmx:100819559 2083.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0631 13 5052080 5059586 Prci12g2175 12 39205501 39212198 CCT