LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci13g0618	ATGTTCGCACCAAGGGATTTCATCCCCGTAGATAAGATTGATATTGCCCATAAAGAAGGTGTCCCTCCATCGGGAGAAGAAATGCATCAATTTTTTCTTCCCTTTCGAGGATTCTGTGCTCGAAAAGGGATTGAAGCAAAGGAATTGGTTCTGCATGACCTTGATGTTTCAAGCGCCCTTACTTATTATCTCAACAACAACTCTATCAGAAACATCGTTGTTGGTGCTTCTCACCGTAATGTTCTTACGAGGAAATTCAAAGATGCAGATGTCCCCACTTGCTTAATCAAGTCTTTGCCTGAGTCCTGCGTAATATACGTTATATCAAAAGGAAAAGTACAAAATATCAAACCAACAGGTCAAAATCAAAATTGTTGCAGCATAACAGCTAAATCTATAAAAGACAGTCACCGAGGAAATTCTCAAGCTGATGATTCACAGAGGCTTCCTAACATCCCTGATTCTGAAGAAGAAAACAGAGATTCAGTCGGCCATGGACGTGGACAAGGCTCAGGCCTTGATGGGGCATCAAATAGTCAAAATCATACCTCTACAGATAATTCACAACATGAACCAAATGGAGAAGCTGGTTCACCAGTGTCAAATGAAAGTCCATATTCCTTCATTAGTGACATGTCAGGGCCGAATAGTTTTCAATCAAATGATAAGTTCCACGAAAACCAAGAAGCATTCGAGAACTTGGACAGTTGCTGGAGCCTATCTTCAAAAAGCCCAAAAGCCTTGGAGAGCGAAATAAGGAAATTAAAATTGGAACTGAGAAAAACAATGGAGAAATATACTTTAGCTTGCAAAGAAGCTATTGAAGCAAAAAAGAAGGCAATGGAGCTTGAACAGATTAGGGAAGAAGAAGGACGCAACCTAGAAAAAGCTAGGCTCGCTGAAGAGGCTGCATTGGCTTTGACAGAGGTAGAGAGAGAGAAAACCAGGGCTGCATTGGAGTCAGCACAAATGGCAAAACTCCTAGCAGAAATGGAGACCGAGAAGAGAAAGCAGGCAGAAACAAGAGCCATGCATGAAGAAGAGGAGAAGAAAAAAGCAGTAAATGCACTTGCACAAAATCTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTAGCGACAAACTACTTTGACAATTCATTGAAAATTGGTGAAGGTGGATATGGGCCTGTTTTTAGAGGGATGCTCGATCACACTGTTGTTGCCATCAAGGTCTTGAGACCAGACATAGCATCTGGGGAGAAGCAATTTTTTCAAGAGGTTGAAGTTTTGAGCACCATAAGACATCCTAACATGGTTCTCCTCCTAGGTGCCTGCCCAGAGTATGGATGCCTTGTGTACGAATATTTGGAAAATGGCAGCTTAGAAGACCGTCTCTTCCAGAAAGATAACACCCCACCAATTCCGTGGAAACTTCGATTCCAGATTGCAGCTGAAATTGCCACTGGCCTTAACTTCCTTCACCAAACGAAGCCTGAACCACTGGTGCATCGTGACCTCAAGCCTGCAAATATACTCCTAGACAAGAACTACAAGACCAAGATTAGTGATGTGGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTGATAAAACCACTCAGTATCGTATGACAGCTGCAGCGGGTACATTCTGCTATATTGACCCTGAGTATCAACAAACAGGATTGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGTACTGCTGCTTCAGATCCTTACAGCAAAGCCTCCAATGGGTTTGTCCCACCTGGTTGAAAAGGCTATCCAAACAGGCAAATTTCCGGAGGTGCTTGATCCAAATGTGACAGATTGGCCTGTTGAAGAGGCTTTATCATTCGCTATGTTGGCTTTGAAGTGTTGTGAGTTGAGGAAACGAGACAGACCAAGTCTTGGTTCAGTCATTTTGCCGGAGCTAGGTCGACTCAAAGATTTGGAAGAGGACAGAGACATGAAAGAAGACACTGATAGCCCTGACGGATTTGATAGCCAGAACCGAGAGGTAATGAGTAGCAACGTTAAAGTGGAAATGGAGAAAAGGCAGAGGAAACCCATGAAATCCCTGAGCAGCAAATGCAGTAGCAGCAGAAGTAAAATAAGAGAAGGAAGCCTCATTGCAGCATCAGGAAAACAAGTTGAGGTTGCAAATAGGCAAGATACTGATGAGACAGGAAGCTGCTGGTCTTTTGGAAGTTGCTCCATTATTCACCCCAGTTCTTTTTAA	2232	0.4283	MFAPRDFIPVDKIDIAHKEGVPPSGEEMHQFFLPFRGFCARKGIEAKELVLHDLDVSSALTYYLNNNSIRNIVVGASHRNVLTRKFKDADVPTCLIKSLPESCVIYVISKGKVQNIKPTGQNQNCCSITAKSIKDSHRGNSQADDSQRLPNIPDSEEENRDSVGHGRGQGSGLDGASNSQNHTSTDNSQHEPNGEAGSPVSNESPYSFISDMSGPNSFQSNDKFHENQEAFENLDSCWSLSSKSPKALESEIRKLKLELRKTMEKYTLACKEAIEAKKKAMELEQIREEEGRNLEKARLAEEAALALTEVEREKTRAALESAQMAKLLAEMETEKRKQAETRAMHEEEEKKKAVNALAQNLIRCRRYDISEIEVATNYFDNSLKIGEGGYGPVFRGMLDHTVVAIKVLRPDIASGEKQFFQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLFQKDNTPPIPWKLRFQIAAEIATGLNFLHQTKPEPLVHRDLKPANILLDKNYKTKISDVGLARLVPPSVADKTTQYRMTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVLLLQILTAKPPMGLSHLVEKAIQTGKFPEVLDPNVTDWPVEEALSFAMLALKCCELRKRDRPSLGSVILPELGRLKDLEEDRDMKEDTDSPDGFDSQNREVMSSNVKVEMEKRQRKPMKSLSSKCSSSRSKIREGSLIAASGKQVEVANRQDTDETGSCWSFGSCSIIHPSSF	743

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	690	704	-	-
	Prci13g0618	743	Gene3D	Transferase(Phosphotransferase) domain 1	452	671	-	-
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	133	222	-	-
	Prci13g0618	743	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	497	509	IPR008271	GO:0004672\|GO:0006468
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	150	164	-	-
	Prci13g0618	743	ProSiteProfiles	Protein kinase domain profile.	379	642	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci13g0618	743	SMART	serkin_6	379	642	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci13g0618	743	Coils	Coil	328	356	-	-
	Prci13g0618	743	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	351	451	-	-
	Prci13g0618	743	Coils	Coil	280	300	-	-
	Prci13g0618	743	SUPERFAMILY	Protein kinase-like (PK-like)	360	637	IPR011009	-
	Prci13g0618	743	Pfam	Protein kinase domain	382	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	649	664	-	-
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	172	222	-	-
	Prci13g0618	743	FunFam	Os07g0541700 protein	452	543	-	-
	Prci13g0618	743	MobiDBLite	consensus disorder prediction	649	704	-	-
	Prci13g0618	743	Gene3D	Phosphorylase Kinase; domain 1	356	451	-	-
	Prci13g0618	743	PANTHER	OS02G0152300 PROTEIN	24	697	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci13g0618	Prci-Chr13	4980260	4986161	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci13g0618	48	651	Receptor kinase-like Gene Family	AT5G12000	54.281	0.0	603

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Prci13g0618		Pkinase	1e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci13g0618	-		-	pcin:129290405	1416.36