Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0616 ATGGATCTCTCGCAAATGGCTTCGAAGTCAGGAGGAGGCCCTGCTGCTGCAGCAGAGGACGTCGGGGCAACGGTGATCGCCATTGATAAGGATAAGAACAGCCAACATGCAGTCAAATGGGCCGTGGATCACCTCGTAAAGAACTCCTGCACCCTTATCCATGTTCGCACCAAGGGATTTCATCCCCATAAGATTGATATTGCCCATAAAGAAGGTGTCCCTCCATCGGGAGAAGAAATGCATCAATTTTTTCTTCCCTTTCGAGGATTCTGTGCTCGAAAAGGGATTGAAGCAAAGGAATTGGTTCTGCATGACCTTGATGTTTCAAGCGCCCTTACTTATTATCTCAACAACAACTCTATCAGAAACATCGTTGTTGGTGCTTCTCACCGTAATGTTCTTACGAGGAAATTCAAAGATGCAGATGTCCCCACTTGCTTAATCAAGTCTTTGCCTGAGTCCTGCGTAATATACGTTATATCAAAAGGAAAAGTACAAAATATCAAACCAACAGGTCAAAATCAAAATTGTTGCAGCATAACAGCTAAATCTATAAAAGACAGTCACCGAGGAAATTCTCAAGCTGATGATTCACAGAGGCTTCCTAACATCCCTGATTCTGAAGAAGAAAACAGAGATTCAGTCGGCCATGGACGTGGACAAGGCTCAGGCCTTGATGGGGCATCAAATAGTCAAAATCATACCTCTACAGATAATTCACAACATGAACCAAATGGAGAAGCTGGTTCACCAGTGTCAAATGAAAGTCCATATTCCTTCATTAGTGACATGTCAGGGCCGAATAGTTTTCAATCAAATGATAAGTTCCACGAAAACCAAGAAGCATTCGAGAACTTGGACAGTTGCTGGAGCCTATCTTCAAAAAGCCCAAAAGCCTTGGAGAGCGAAATAAGGAAATTAAAATTGGAACTGAGAAAAACAATGGAGAAATATACTTTAGCTTGCAAAGAAGCTATTGAAGCAAAAAAGAAGGCAATGGAGCTTGAACAGATTAGGGAAGAAGAAGGACGCAACCTAGAAAAAGCTAGGCTCGCTGAAGAGGCTGCATTGGCTTTGACAGAGGTAGAGAGAGAGAAAACCAGGGCTGCATTGGAGTCAGCACAAATGGCAAAACTCCTAGCAGAAATGGAGACCGAGAAGAGAAAGCAGGCAGAAACAAGAGCCATGCATGAAGAAGAGGAGAAGAAAAAAGCAGTAAATGCACTTGCACAAAATCTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTAGCGACAAACTACTTTGACAATTCATTGAAAATTGGTGAAGGTGGATATGGGCCTGTTTTTAGAGGGATGCTCGATCACACTGTTGTTGCCATCAAGGTCTTGAGACCAGACATAGCATCTGGGGAGAAGCAATTTTTTCAAGAGGTTGAAGTTTTGAGCACCATAAGACATCCTAACATGGTTCTCCTCCTAGGTGCCTGCCCAGAGTATGGATGCCTTGTGTACGAATATTTGGAAAATGGCAGCTTAGAAGACCGTCTCTTCCAGAAAGATAACACCCCACCAATTCCGTGGAAACTTCGATTCCAGATTGCAGCTGAAATTGCCACTGGCCTTAACTTCCTTCACCAAACGAAGCCTGAACCACTGGTGCATCGTGACCTCAAGCCTGCAAATATACTCCTAGACAAGAACTACAAGACCAAGATTAGTGATGTGGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTGATAAAACCACTCAGTATCGTATGACAGCTGCAGCGGGTACATTCTGCTATATTGACCCTGAGTATCAACAAACAGGATTGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGTACTGCTGCTTCAGATCCTTACAGCAAAGCCTCCAATGGGTTTGTCCCACCTGGTTGAAAAGGCTATCCAAACAGGCAAATTTCCGGAGGTGCTTGATCCAAATGTGACAGATTGGCCTGTTGAAGAGGCTTTATCATTCGCTATGTTGGCTTTGAAGTGTTGTGAGTTGAGGAAACGAGACAGACCAAGTCTTGGTTCAGTCATTTTGCCGGAGCTAGGTCGACTCAAAGATTTGGAAGAGGACAGAGACATGAAAGAAGACACTGATAGCCCTGACGGATTTGATAGCCAGAACCGAGAGGTAATGAGTAGCAACGTTAAAGTGGAAATGGAGAAAAGGCAGAGGAAACCCATGAAATCCCTGAGCAGCAAATGCAGTAGCAGCAGAAGTAAAATAAGAGAAGGAAGCCTCATTGCAGCATCAGGAAAACAAGTTGAGGTTGCAAATAGGCAAGATACTGATGAGACAGGAAGCTGCTGGTCTTTTGGAAGTTGCTCCATTATTCACCCCAGTTCTTTTTAA 2388 0.4359 MDLSQMASKSGGGPAAAAEDVGATVIAIDKDKNSQHAVKWAVDHLVKNSCTLIHVRTKGFHPHKIDIAHKEGVPPSGEEMHQFFLPFRGFCARKGIEAKELVLHDLDVSSALTYYLNNNSIRNIVVGASHRNVLTRKFKDADVPTCLIKSLPESCVIYVISKGKVQNIKPTGQNQNCCSITAKSIKDSHRGNSQADDSQRLPNIPDSEEENRDSVGHGRGQGSGLDGASNSQNHTSTDNSQHEPNGEAGSPVSNESPYSFISDMSGPNSFQSNDKFHENQEAFENLDSCWSLSSKSPKALESEIRKLKLELRKTMEKYTLACKEAIEAKKKAMELEQIREEEGRNLEKARLAEEAALALTEVEREKTRAALESAQMAKLLAEMETEKRKQAETRAMHEEEEKKKAVNALAQNLIRCRRYDISEIEVATNYFDNSLKIGEGGYGPVFRGMLDHTVVAIKVLRPDIASGEKQFFQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLFQKDNTPPIPWKLRFQIAAEIATGLNFLHQTKPEPLVHRDLKPANILLDKNYKTKISDVGLARLVPPSVADKTTQYRMTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVLLLQILTAKPPMGLSHLVEKAIQTGKFPEVLDPNVTDWPVEEALSFAMLALKCCELRKRDRPSLGSVILPELGRLKDLEEDRDMKEDTDSPDGFDSQNREVMSSNVKVEMEKRQRKPMKSLSSKCSSSRSKIREGSLIAASGKQVEVANRQDTDETGSCWSFGSCSIIHPSSF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0616 795 Gene3D HUPs 24 156 IPR014729 -
Prci13g0616 795 MobiDBLite consensus disorder prediction 224 274 - -
Prci13g0616 795 PANTHER OS02G0152300 PROTEIN 25 749 - -
Prci13g0616 795 Gene3D Transferase(Phosphotransferase) domain 1 504 723 - -
Prci13g0616 795 Coils Coil 380 408 - -
Prci13g0616 795 MobiDBLite consensus disorder prediction 701 756 - -
Prci13g0616 795 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 149 - -
Prci13g0616 795 Coils Coil 332 352 - -
Prci13g0616 795 MobiDBLite consensus disorder prediction 701 716 - -
Prci13g0616 795 MobiDBLite consensus disorder prediction 185 274 - -
Prci13g0616 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Prci13g0616 795 Pfam Protein kinase domain 434 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0616 795 SMART serkin_6 431 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0616 795 ProSiteProfiles Protein kinase domain profile. 431 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0616 795 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 403 503 - -
Prci13g0616 795 MobiDBLite consensus disorder prediction 202 216 - -
Prci13g0616 795 FunFam Os07g0541700 protein 504 595 - -
Prci13g0616 795 Gene3D Phosphorylase Kinase; domain 1 408 503 - -
Prci13g0616 795 MobiDBLite consensus disorder prediction 742 756 - -
Prci13g0616 795 CDD STK_N 24 163 - -
Prci13g0616 795 SUPERFAMILY Protein kinase-like (PK-like) 413 689 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0616 Prci-Chr13 4979490 4986161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0616 22 700 Receptor kinase-like Gene Family AT1G17540 47.518 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci13g0616 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0616 - - pcin:129290405 1538.47