Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0610 ATGATGAATTTGCAACAAGTTGGGCAGTCTAGATCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAGCCAAGTCAGAGAATAAGATCTCATCTGGGAAGTCAAATTCCAACAGACTGGCAATTACAGGTGATGGTCCTTCACATGATCGACTAGTATATGTTACATCATGTCTTATTGGACAGCAGGTGGAAGTGCATGTTAAAAATGGATCTATATACTCTGGAATATTCCATGCAACAAATACTGAGAGGGATTTTGGAATCATTTTAAAGATGGCTCGCTTGACAAAGGATGGTTCTTTGCGAGGGCAGAAGTCTGGTATAGAATTGGTCAGCAAGGCTTCTTTAAAGACTTTAATTATACCTGGCAAAGAATTTGTACAAGTCATCGCAAAGGGCGTTGCTGTTACTAGGGACGGCCTACCTAGTGAAGCTCATCATGAAATGTATCAGGACATCATTGTTGACTCAATAATATCACAATCACGTCATGTTGACATGGAAAGAGAACTACAACCATGGGTGCCTGACGAAGATGATCCACAATGCCCTGAACTAGAAAATGTCTTTGACGAAACTTGGAATAGGGGCTGGGATCAGTTTGAAGCAAACAAAACGTTGTTTGGTGTAAAAAGCACGTTCAATGAGGAACTTTATACCACAAAGCTCCAGAAAGGCCCTCAGACAAGAGAGTTGGAAAAACAAGCTTTAAGAATAGCAAGAGAGATTGAGGGCGAGGATACGCAAGATCTTCACCTAGCAGAGGAAAGAGGCCTCTTTCTACATAAGAATTTTGATATTGATGAAGAGGCTAGGTTCTCTTCAGTCCATAGGGATAGAGGGGTTGATGACAGTAGCTATGATGAAAATGAGGATATTTTGTTGGATTCACACAATTCTGAAACCTTTGGTGGTACCGTTCCTTCAGTTGTTATGAGGTCTATTGAATCAAGTGATGGGAAAGATGATGATGGAGTCAGAACATTGTCAAATTCCTCCTCTACGGATTTACCACATTCATCTCAGTCAAGTAATGATGTGGATTTAGGTCGTGCTGGCTCTCACAATCTTGATAGTCAGTTAGCATCTGAACTCCCTACAACAACTGACCCTACTTTGGATGCTGAATGCAGGATGCAGAAGGACTCGCTTAGTGATCTGCATGGAGCCATTGACAATAGCAAGGAAGAAAATCAGATACAATCTGGGGATGTTCAGCTGTCAAAATCTGAAGACTTACAGTCATATCACAACTTGAAGAAGGATGACCCTGATACTGGGGGATTGTCTTCAAATGCCACCTCTTATGGCCCTTCATCTCATATTTCATCAAAGAATCCTGAAAAGACAGATTGTGTGAGAGGTGTTGCAGCATCTTCTGGTCCTGGTCTATCACCTAGTTCTTCAGTTGGTTCATTATCTTCAGAAAAATCGATGCTGAATCCGAATGCAAAGGAATTCAAGCTCAATCCAAATGCAAAGAGTTTCATTCCATCCCAATCACCTGTTAGGCCTCCCTCACAGTTGTCAGATGTCTCCTTCTATTATCCAACTAATGTAACTACTGTACCTCACATGCCTGCCATGCCTATGGAACTTGGAATGGGGCATGCATTTGCTGGGCAGCAACCTTTACTGTATAATCCACAAGTAGCACAAGTGTCATCACAAGCATATTTCCATCCAAACGGACCACAGTATGGACAGCTTCTTGGTCATCCTAGGCAAGTTTTGTACGTGCCAGGTTATCTGCCTGAAACACCATACAAGGGACGGGATTACTAA 1797 0.4218 MMNLQQVGQSRSSNGYGRRKSEREGAAKSENKISSGKSNSNRLAITGDGPSHDRLVYVTSCLIGQQVEVHVKNGSIYSGIFHATNTERDFGIILKMARLTKDGSLRGQKSGIELVSKASLKTLIIPGKEFVQVIAKGVAVTRDGLPSEAHHEMYQDIIVDSIISQSRHVDMERELQPWVPDEDDPQCPELENVFDETWNRGWDQFEANKTLFGVKSTFNEELYTTKLQKGPQTRELEKQALRIAREIEGEDTQDLHLAEERGLFLHKNFDIDEEARFSSVHRDRGVDDSSYDENEDILLDSHNSETFGGTVPSVVMRSIESSDGKDDDGVRTLSNSSSTDLPHSSQSSNDVDLGRAGSHNLDSQLASELPTTTDPTLDAECRMQKDSLSDLHGAIDNSKEENQIQSGDVQLSKSEDLQSYHNLKKDDPDTGGLSSNATSYGPSSHISSKNPEKTDCVRGVAASSGPGLSPSSSVGSLSSEKSMLNPNAKEFKLNPNAKSFIPSQSPVRPPSQLSDVSFYYPTNVTTVPHMPAMPMELGMGHAFAGQQPLLYNPQVAQVSSQAYFHPNGPQYGQLLGHPRQVLYVPGYLPETPYKGRDY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0610 598 MobiDBLite consensus disorder prediction 31 46 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 1 15 - -
Prci13g0610 598 Pfam LsmAD domain 212 282 IPR009604 -
Prci13g0610 598 SMART LsmAD_2 212 283 IPR009604 -
Prci13g0610 598 MobiDBLite consensus disorder prediction 320 376 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 421 482 - -
Prci13g0610 598 Gene3D - 59 133 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 1 46 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 465 482 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 331 376 - -
Prci13g0610 598 MobiDBLite consensus disorder prediction 429 450 - -
Prci13g0610 598 PANTHER ATAXIN 2-RELATED 22 589 IPR045117 GO:0003723
Prci13g0610 598 MobiDBLite consensus disorder prediction 16 30 - -
Prci13g0610 598 Pfam Ataxin 2 SM domain 52 136 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0610 Prci-Chr13 4928818 4937038 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0610 - - gmx:100782491 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0610 13 4928818 4937038 Prci12g2219 12 39801158 39805981 CCT
Prci13g0610 13 4928818 4937038 Prci13g0610 13 4928818 4937038 ECH