Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0607 ATGGGATTGCCTGATTATGCTTCAATTCTGATCGTAGCAGCCCTGATAGCTGCACTTTTATTCTTCAGTCTCACCATGCTTAGTTGGTGTACCTACAGAAGTATTGATCTTATACAATCTATTCCATCCACAACAGCAAACTTACCTCTTGATAACAAGCTCCAATGCTGCAGCAAAAGCCTAGAGTCTCATTCCAAGACATTCCAGTACAAAGTTGCAGAAACTGTACAAGGCACTGATCAGACAGAATGTATCGTCTGCTTGACACCCTTTGAAGAAGGAGACTCTGTGAGGCAGCTTCATAGCTGCAAACATATCTTTCATATGATTTGCATTGACACTTGGCTTGCCTCTCATTCTGCCTGCCCTTTGTGCAGAAACCAGATAGACCATGTGCCTTCTCCTCCAAGTGCCACTGAGGAAGTGTCCCCTCCAATAAGGTCTCTGGCTTCAGAGGAAAATGGCCACAATCAGATTATCTTGTTCCTTGTCAGCTCCTGA 501 0.4431 MGLPDYASILIVAALIAALLFFSLTMLSWCTYRSIDLIQSIPSTTANLPLDNKLQCCSKSLESHSKTFQYKVAETVQGTDQTECIVCLTPFEEGDSVRQLHSCKHIFHMICIDTWLASHSACPLCRNQIDHVPSPPSATEEVSPPIRSLASEENGHNQIILFLVSS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0607 166 SUPERFAMILY RING/U-box 73 133 - -
Prci13g0607 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 138 IPR013083 -
Prci13g0607 166 CDD RING-H2_EL5-like 83 126 - -
Prci13g0607 166 Pfam Ring finger domain 83 126 IPR001841 -
Prci13g0607 166 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 132 IPR044675 -
Prci13g0607 166 SMART ring_2 84 125 IPR001841 -
Prci13g0607 166 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0607 Prci-Chr13 4868752 4869252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0607 68 138 C3H Transcription Factor Family AT5G17600 46.479 4.27e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0607 - - pcin:129290944 327.405