Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0603 ATGGAAACGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGCGTAGATAGAAGTAGCTCTGCTTTGTCTTCACCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTATGACCAGATTGAAATGGGTGTTGATGTGGACACTGCGCTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGAGAAGTTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAGAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCTCCTGGTCTTTCCTATGTAAATGTAGACAGCCAGTGTTCGGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTGTTCTAGACCTTCGGAAGGACAAATAGAAAGTGGATTATCTACCTCTGCTGTCTATTGTGATTTGAAGCCTGATTTTTCTATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATTAGAGAACTTCATGAACTATTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAGTTAGTTAGAAAATGTGAGGAAGGTATTGATGGAAATGTGGATGCTGTCCTCTTCAAGGATACTACTGCTGGAGAAGAGGATATCAACTGTAGGGATTTATCATGTGCTGAGGGTATTGGAAATGAAAATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAATGGGGAACATGATTTGTGCAGTGAGAGTCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTAAAAATGAGTCCAGGGACCACAATCCTAGGTTATTAAGTTCAAACAGAAGTGCGGAACTTGGGCATGTCTCTCCAAACTCATACAATGGTTCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTATTGTAACTAGGTTTGACTCTCTGGGAGGTTTGGGAATTTACATACCTTGTGTTTCCCGAATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGAAATTTCATCAAAGCAGTGGCATGGTTGAGGTTGCCAACTTAAGCAATGAGGCCTTTGGAGAGCATGGTTCTCAAGAAGATGAGGGTAGGGACAAAGTCTTAAAATCCAGATCCACATCTTCAAAATTTCAGCAGCGATCTGCTGTTGAGCAGAAAGATGAACAATCTCCACTACTGGACAGAATTGAACCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTCAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGTGGCATGAGAAGAAAACATCATAGAGCCTGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGATGGTCAGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTGTGAACTCGAGGAAGCATGGTACCGTCCCTATTCCTGAGCCAATTTTAGTACGAGTAAGAGAGCTTGCCGGAATGAATTCTCAGGTACCTACGAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATAGGTCAGGGTACTTGTAG 1971 0.4257 METLVGIEDNDEGKLEDSGVDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDVDTALHEGCSSIERSSSEKLQLECSEDTAEADPEKLNARLQYIEQMLQKVKEEEKLHLACGSPGLSYVNVDSQCSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQIESGLSTSAVYCDLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKLVRKCEEGIDGNVDAVLFKDTTAGEEDINCRDLSCAEGIGNENNQVVSGKRLRSHNGEHDLCSESLQTEQRAAKRIRKPTRRYIEELSKNESRDHNPRLLSSNRSAELGHVSPNSYNGSARNVFSEGRTIVTRFDSLGGLGIYIPCVSRIRRCRPRKNIMPLMKFHQSSGMVEVANLSNEAFGEHGSQEDEGRDKVLKSRSTSSKFQQRSAVEQKDEQSPLLDRIEPRQESRLRKADLSSYSSDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGVNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACTGVAHDDRSGYL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0603 656 MobiDBLite consensus disorder prediction 463 479 - -
Prci13g0603 656 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 595 IPR017930 -
Prci13g0603 656 ProSiteProfiles Myb-like domain profile. 544 591 IPR001005 -
Prci13g0603 656 SMART sant 540 593 IPR001005 -
Prci13g0603 656 MobiDBLite consensus disorder prediction 461 517 - -
Prci13g0603 656 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 638 - -
Prci13g0603 656 MobiDBLite consensus disorder prediction 365 392 - -
Prci13g0603 656 MobiDBLite consensus disorder prediction 174 198 - -
Prci13g0603 656 Pfam Myb-like DNA-binding domain 543 591 IPR001005 -
Prci13g0603 656 MobiDBLite consensus disorder prediction 489 517 - -
Prci13g0603 656 MobiDBLite consensus disorder prediction 365 379 - -
Prci13g0603 656 SUPERFAMILY Homeodomain-like 538 597 IPR009057 -
Prci13g0603 656 CDD SANT_TRF 542 592 - -
Prci13g0603 656 MobiDBLite consensus disorder prediction 1 28 - -
Prci13g0603 656 Gene3D - 531 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0603 Prci-Chr13 4858366 4867261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0603 544 602 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 7.72e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0603 - - gmx:100782501 813.913