Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0602 ATGGAAACGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGCGTAGATAGAAGTAGCTCTGCTTTGTCTTCACCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTATGACCAGATTGAAATGGGTGTTGATGTGGACACTGCGCTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGAGAAGTTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAGAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCTCCTGGTCTTTCCTATGTAAATGTAGACAGCCAGTGTTCGGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTGTTCTAGACCTTCGGAAGGACAAATAGAAAGTGGATTATCTACCTCTGCTGTCTATTGTGATTTGAAGCCTGATTTTTCTATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATTAGAGAACTTCATGAACTATTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAGTTAGTTAGAAAATGTGAGGAAGGTATTGATGGAAATGTGGATGCTGTCCTCTTCAAGGATACTACTGCTGGAGAAGAGGATATCAACTGTAGGGATTTATCATGTGCTGAGGGTATTGGAAATGAAAATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAATGGGGAACATGATTTGTGCAGTGAGAGTCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTAAAAATGAGTCCAGGGACCACAATCCTAGGTTATTAAGTTCAAACAGAAGTGCGGAACTTGGGCATGTCTCTCCAAACTCATACAATGGTTCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTATTGTAACTAGGTTTGACTCTCTGGGAGGTTTGGGAATTTACATACCTTGTGTTTCCCGAATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGAATGATATGATTCCGTCCCAGAAATTTCATCAAAGCAGTGGCATGGTTGAGGTTGCCAACTTAAGCAATGAGGCCTTTGGAGAGCATGGTTCTCAAGAAGATGAGGGTAGGGACAAAGTCTTAAAATCCAGATCCACATCTTCAAAATTTCAGCAGCGATCTGCTGTTGAGCAGAAAGATGAACAATCTCCACTACTGGACAGAATTGAACCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTCAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGTGGCATGAGAAGAAAACATCATAGAGCCTGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGATGGTCAGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTGTGAACTCGAGGAAGCATGGTACCGTCCCTATTCCTGAGCCAATTTTAGTACGAGTAAGAGAGCTTGCCGGAATGAATTCTCAGGTACCTACGAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATAGGTCAGGGTACTTGTAG 1992 0.4257 METLVGIEDNDEGKLEDSGVDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDVDTALHEGCSSIERSSSEKLQLECSEDTAEADPEKLNARLQYIEQMLQKVKEEEKLHLACGSPGLSYVNVDSQCSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQIESGLSTSAVYCDLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKLVRKCEEGIDGNVDAVLFKDTTAGEEDINCRDLSCAEGIGNENNQVVSGKRLRSHNGEHDLCSESLQTEQRAAKRIRKPTRRYIEELSKNESRDHNPRLLSSNRSAELGHVSPNSYNGSARNVFSEGRTIVTRFDSLGGLGIYIPCVSRIRRCRPRKNIMPLMNDMIPSQKFHQSSGMVEVANLSNEAFGEHGSQEDEGRDKVLKSRSTSSKFQQRSAVEQKDEQSPLLDRIEPRQESRLRKADLSSYSSDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGVNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACTGVAHDDRSGYL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0602 663 MobiDBLite consensus disorder prediction 468 524 - -
Prci13g0602 663 ProSiteProfiles Myb-like domain profile. 551 598 IPR001005 -
Prci13g0602 663 MobiDBLite consensus disorder prediction 365 392 - -
Prci13g0602 663 SUPERFAMILY Homeodomain-like 545 604 IPR009057 -
Prci13g0602 663 MobiDBLite consensus disorder prediction 174 198 - -
Prci13g0602 663 Gene3D - 538 646 - -
Prci13g0602 663 CDD SANT_TRF 549 599 - -
Prci13g0602 663 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 645 - -
Prci13g0602 663 MobiDBLite consensus disorder prediction 365 379 - -
Prci13g0602 663 SMART sant 547 600 IPR001005 -
Prci13g0602 663 MobiDBLite consensus disorder prediction 470 486 - -
Prci13g0602 663 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 543 602 IPR017930 -
Prci13g0602 663 MobiDBLite consensus disorder prediction 1 28 - -
Prci13g0602 663 MobiDBLite consensus disorder prediction 496 524 - -
Prci13g0602 663 Pfam Myb-like DNA-binding domain 550 598 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0602 Prci-Chr13 4858365 4867261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0602 551 609 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 8.56e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0602 - - gmx:100782501 806.979