Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0601 ATGGAAACGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGCGTAGATAGAAGTAGCTCTGCTTTGTCTTCACCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTATGACCAGATTGAAATGGGTGTTGATGTGGACACTGCGCTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGAGAAGTTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAGAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCTCCTGGTCTTTCCTATGTAAATGTAGACAGCCAGTGTTCGGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTGTTCTAGACCTTCGGAAGGACAAATAGAAAGTGGATTATCTACCTCTGCTGTCTATTGTGATTTGAAGCCTGATTTTTCTATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATTAGAGAACTTCATGAACTATTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAGTTAGTTAGAAAATGTGAGGAAGGTATTGATGGAAATGTGGATGCTGTCCTCTTCAAGGATACTACTGCTGGAGAAGAGGATATCAACTGTAGGGATTTATCATGTGCTGAGGGTATTGGAAATGAAAATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAATGGGGAACATGATTTGTGCAGTGAGAGTCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTAAAAATGAGTCCAGGGACCACAATCCTAGGTTATTAAGTTCAAACAGAAGTGCGGAACTTGGGCATGTCTCTCCAAACTCATACAATGGTTCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTATTGTAACTAGGTTTGACTCTCTGGGAGGTTTGGGAATTTACATACCTTGTGTTTCCCGAATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGGTGAGCGGTGCTGTTTCATTTCAAATTAATGATATGATTCCGTCCCAGAAATTTCATCAAAGCAGTGGCATGGTTGAGGTTGCCAACTTAAGCAATGAGGCCTTTGGAGAGCATGGTTCTCAAGAAGATGAGGGTAGGGACAAAGTCTTAAAATCCAGATCCACATCTTCAAAATTTCAGCAGCGATCTGCTGTTGAGCAGAAAGATGAACAATCTCCACTACTGGACAGAATTGAACCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTCAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGTGGCATGAGAAGAAAACATCATAGAGCCTGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGATGGTCAGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTGTGAACTCGAGGAAGCATGGTACCGTCCCTATTCCTGAGCCAATTTTAGTACGAGTAAGAGAGCTTGCCGGAATGAATTCTCAGGTACCTACGAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATAGGTCAGGGTACTTGTAG 2019 0.4255 METLVGIEDNDEGKLEDSGVDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDVDTALHEGCSSIERSSSEKLQLECSEDTAEADPEKLNARLQYIEQMLQKVKEEEKLHLACGSPGLSYVNVDSQCSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQIESGLSTSAVYCDLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKLVRKCEEGIDGNVDAVLFKDTTAGEEDINCRDLSCAEGIGNENNQVVSGKRLRSHNGEHDLCSESLQTEQRAAKRIRKPTRRYIEELSKNESRDHNPRLLSSNRSAELGHVSPNSYNGSARNVFSEGRTIVTRFDSLGGLGIYIPCVSRIRRCRPRKNIMPLMVSGAVSFQINDMIPSQKFHQSSGMVEVANLSNEAFGEHGSQEDEGRDKVLKSRSTSSKFQQRSAVEQKDEQSPLLDRIEPRQESRLRKADLSSYSSDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGVNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACTGVAHDDRSGYL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0601 672 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 552 611 IPR017930 -
Prci13g0601 672 MobiDBLite consensus disorder prediction 479 495 - -
Prci13g0601 672 Gene3D - 547 655 - -
Prci13g0601 672 MobiDBLite consensus disorder prediction 477 533 - -
Prci13g0601 672 MobiDBLite consensus disorder prediction 365 392 - -
Prci13g0601 672 SUPERFAMILY Homeodomain-like 554 613 IPR009057 -
Prci13g0601 672 MobiDBLite consensus disorder prediction 174 198 - -
Prci13g0601 672 MobiDBLite consensus disorder prediction 505 533 - -
Prci13g0601 672 MobiDBLite consensus disorder prediction 365 379 - -
Prci13g0601 672 CDD SANT_TRF 558 608 - -
Prci13g0601 672 Pfam Myb-like DNA-binding domain 559 607 IPR001005 -
Prci13g0601 672 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 654 - -
Prci13g0601 672 MobiDBLite consensus disorder prediction 1 28 - -
Prci13g0601 672 ProSiteProfiles Myb-like domain profile. 560 607 IPR001005 -
Prci13g0601 672 SMART sant 556 609 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0601 Prci-Chr13 4858364 4867261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0601 560 618 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 7.89e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0601 - - gmx:100782501 803.512