Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0600 ATGGAAACGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGCGTAGATAGAAGTAGCTCTGCTTTGTCTTCACCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTATGACCAGATTGAAATGGGTGTTGATGTGGACACTGCGCTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGAGAAGTTAAATGCACGACTTCAGATGTTGCAGAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCTCCTGGTCTTTCCTATGTAAATGTAGACAGCCAGTGTTCGGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTGTTCTAGACCTTCGGAAGGACAAATAGAAAGTGGATTATCTACCTCTGCTGTCTATTGTGATTTGAAGCCTGATTTTTCTATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATTAGAGAACTTCATGAACTATTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAGTTAGTTAGAAAATGTGAGGAAGGTATTGATGGAAATGTGGATGCTGTCCTCTTCAAGGATACTACTGCTGGAGAAGAGGATATCAACTGTAGGGATTTATCATGTGCTGAGGGTATTGGAAATGAAAATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAATGGGGAACATGATTTGTGCAGTGAGAGTCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTAAAAATGAGTCCAGGGACCACAATCCTAGGTTATTAAGTTCAAACAGAAGTGCGGAACTTGGGCATGTCTCTCCAAACTCATACAATGGTTCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTATTGTAACTAGGTTTGACTCTCTGGGAGGTTTGGGAATTTACATACCTTGTGTTTCCCGAATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGGTGAGCGGTGCTGTTTCATTTCAAATTAATGATATGATTCCGTCCCAGAAATTTCATCAAAGCAGTGGCATGGTTGAGGTTGCCAACTTAAGCAATGAGGCCTTTGGAGAGCATGGTTCTCAAGAAGATGAGGGTAGGGACAAAGTCTTAAAATCCAGATCCACATCTTCAAAATTTCAGCAGCGATCTGCTGTTGAGCAGAAAGATGAACAATCTCCACTACTGGACAGAATTGAACCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTCAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGTGGCATGAGAAGAAAACATCATAGAGCCTGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGATGGTCAGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTGTGAACTCGAGGAAGCATGGTACCGTCCCTATTCCTGAGCCAATTTTAGTACGAGTAAGAGAGCTTGCCGGAATGAATTCTCAGGTACCTACGAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATAGGTCAGGGTACTTGTAG 2007 0.426 METLVGIEDNDEGKLEDSGVDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDVDTALHEGCSSIERSSSEKLQLECSEDTAEADPEKLNARLQMLQKVKEEEKLHLACGSPGLSYVNVDSQCSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQIESGLSTSAVYCDLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKLVRKCEEGIDGNVDAVLFKDTTAGEEDINCRDLSCAEGIGNENNQVVSGKRLRSHNGEHDLCSESLQTEQRAAKRIRKPTRRYIEELSKNESRDHNPRLLSSNRSAELGHVSPNSYNGSARNVFSEGRTIVTRFDSLGGLGIYIPCVSRIRRCRPRKNIMPLMVSGAVSFQINDMIPSQKFHQSSGMVEVANLSNEAFGEHGSQEDEGRDKVLKSRSTSSKFQQRSAVEQKDEQSPLLDRIEPRQESRLRKADLSSYSSDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGVNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACTGVAHDDRSGYL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0600 668 MobiDBLite consensus disorder prediction 475 491 - -
Prci13g0600 668 Pfam Myb-like DNA-binding domain 555 603 IPR001005 -
Prci13g0600 668 ProSiteProfiles Myb-like domain profile. 556 603 IPR001005 -
Prci13g0600 668 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 650 - -
Prci13g0600 668 Gene3D - 543 651 - -
Prci13g0600 668 SMART sant 552 605 IPR001005 -
Prci13g0600 668 MobiDBLite consensus disorder prediction 473 529 - -
Prci13g0600 668 MobiDBLite consensus disorder prediction 361 388 - -
Prci13g0600 668 MobiDBLite consensus disorder prediction 170 194 - -
Prci13g0600 668 MobiDBLite consensus disorder prediction 501 529 - -
Prci13g0600 668 MobiDBLite consensus disorder prediction 361 375 - -
Prci13g0600 668 CDD SANT_TRF 554 604 - -
Prci13g0600 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 548 607 IPR017930 -
Prci13g0600 668 SUPERFAMILY Homeodomain-like 550 609 IPR009057 -
Prci13g0600 668 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0600 Prci-Chr13 4858364 4867261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0600 556 614 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 7.98e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0600 - - gmx:100782501 809.29