Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0599 ATGGAAACGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGCGTAGATAGAAGTAGCTCTGCTTTGTCTTCACCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTATGACCAGATTGAAATGGGTGTTGATGTGGACACTGCGCTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGAGAAGTTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAGAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGGATCTCCTGGTCTTTCCTATGTAAATGTAGACAGCCAGTGTTCGGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTGTTCTAGACCTTCGGAAGGACAAATAGAAAGTGGATTATCTACCTCTGCTGTCTATTGTGATTTGAAGCCTGATTTTTCTATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATTAGAGAACTTCATGAACTATTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAGTTAGTTAGAAAATGTGAGGAAGGTATTGATGGAAATGTGGATGCTGTCCTCTTCAAGGATACTACTGCTGGAGAAGAGGATATCAACTGTAGGGATTTATCATGTGCTGAGGGTATTGGAAATGAAAATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAATGGGGAACATGATTTGTGCAGTGAGAGTCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTAAAAATGAGTCCAGGGACCACAATCCTAGGTTATTAAGTTCAAACAGAAGTGCGGAACTTGGGCATGTCTCTCCAAACTCATACAATGGTTCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTATTGTAACTAGGTTTGACTCTCTGGGAGGTTTGGGAATTTACATACCTTGTGTTTCCCGAATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGGTGAGCGGTGCTGTTTCATTTCAAATTAAATTTCATCAAAGCAGTGGCATGGTTGAGGTTGCCAACTTAAGCAATGAGGCCTTTGGAGAGCATGGTTCTCAAGAAGATGAGGGTAGGGACAAAGTCTTAAAATCCAGATCCACATCTTCAAAATTTCAGCAGCGATCTGCTGTTGAGCAGAAAGATGAACAATCTCCACTACTGGACAGAATTGAACCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTCAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGTGGCATGAGAAGAAAACATCATAGAGCCTGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGATGGTCAGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTGTGAACTCGAGGAAGCATGGTACCGTCCCTATTCCTGAGCCAATTTTAGTACGAGTAAGAGAGCTTGCCGGAATGAATTCTCAGGTACCTACGAGCTTCAGCTCAAGCAAACTAACAGCCTGTACTGGGGTTGCTCATGATGATAGGTCAGGGTACTTGTAG 1998 0.4254 METLVGIEDNDEGKLEDSGVDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDVDTALHEGCSSIERSSSEKLQLECSEDTAEADPEKLNARLQYIEQMLQKVKEEEKLHLACGSPGLSYVNVDSQCSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQNIGGCSRPSEGQIESGLSTSAVYCDLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKLVRKCEEGIDGNVDAVLFKDTTAGEEDINCRDLSCAEGIGNENNQVVSGKRLRSHNGEHDLCSESLQTEQRAAKRIRKPTRRYIEELSKNESRDHNPRLLSSNRSAELGHVSPNSYNGSARNVFSEGRTIVTRFDSLGGLGIYIPCVSRIRRCRPRKNIMPLMVSGAVSFQIKFHQSSGMVEVANLSNEAFGEHGSQEDEGRDKVLKSRSTSSKFQQRSAVEQKDEQSPLLDRIEPRQESRLRKADLSSYSSDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGVNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACTGVAHDDRSGYL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0599 665 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 647 - -
Prci13g0599 665 ProSiteProfiles Myb-like domain profile. 553 600 IPR001005 -
Prci13g0599 665 MobiDBLite consensus disorder prediction 472 488 - -
Prci13g0599 665 SUPERFAMILY Homeodomain-like 547 606 IPR009057 -
Prci13g0599 665 MobiDBLite consensus disorder prediction 365 392 - -
Prci13g0599 665 MobiDBLite consensus disorder prediction 498 526 - -
Prci13g0599 665 MobiDBLite consensus disorder prediction 174 198 - -
Prci13g0599 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 545 604 IPR017930 -
Prci13g0599 665 SMART sant 549 602 IPR001005 -
Prci13g0599 665 MobiDBLite consensus disorder prediction 470 526 - -
Prci13g0599 665 MobiDBLite consensus disorder prediction 365 379 - -
Prci13g0599 665 Gene3D - 540 648 - -
Prci13g0599 665 MobiDBLite consensus disorder prediction 1 28 - -
Prci13g0599 665 CDD SANT_TRF 551 601 - -
Prci13g0599 665 Pfam Myb-like DNA-binding domain 552 600 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0599 Prci-Chr13 4858364 4867261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0599 553 611 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 7.86e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0599 - - gmx:100782501 806.208