Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0590 ATGATCCCACACGCTCCTTCAAAATTCTTCATTGTTCATTCCTTCAATCTTTCTTTCCGTTTCTTGGATTATATCAGAAAAGTTACCATGGAGCCACCAAACCCAGCATCGGATCACATTCTGGATTGGTTTGAAGGTTCTGTTTCTTACTATCCATCTTGGATGGATGATCCATATAACCCAGGTTGCATTGTTGAAGATTATAACTTGTGGGGTCATGGACAAGACATGGGCCAACAATTCCATGTTGATGCTGGCACTGGATCTCCCGATGCCGCCACCGGCACCGCCATGTCTGCCGCTATTAGTGGCGGCAAAACACCCACTGAGCCTTACAGTTCTAATAAGCCACCATCTTCTGATCTGTCAAAGAAGAGAAATGATTCTGATGATTTATGTCTCAAACCATCTCAGAATCACAAGTCCAAGAAAATCAAGTGCCGTCCAGCCAATGAAGCTGACAATGGAGATGCAGTTGTAGAAGGGACAACGGTTAAGAAATCTGCAGGGAACAAGAAGGGTTCTGCTAAGGCCAACGGGAATAACTGTAATAACGGTAACAACAAAGAAGGAAGGTGGGCAGAGCAGTTGCTGAATCCTTGTGCTCTAGCCTTGGCTACAGGGAATCTGACTCGTGTGCAGCACCTCTTGTATGTTCTCCATGAGCTCGCCTCGCCGACCGGTGATGCCAACCACCGGCTAGCTGCTCATGGTCTCCGAGCACTAACACAACATTTATCTTCTTCTACTTCCTTTTCTTCCACCACAGCATCTTCCGGGCCTGTTACTTTTGCTTCTGCAGACCCACGGTTCTTTCAAAGATCTCTGCTCAAGTTCTATGAGGTTAGCCCCTGGTTTGCCTTTCCTAATAACATAGCTAATTCTTCCATTCTGCAGATTCTTGCTGAAGAATCCAATAGTTTACAAACACTTCACATCATTGACATTGGGGTCTCTCATGGTTTTCAATGGCCAACATTTTTAGAGGCCTTGACTCGCCGGCCTGGTGGACCTCCTCCACTGGTTCGCCTTACTGTGGTGACTGCGTCAGCAGAAAATGACCAGAACATGGAGACCCCATTTGCAATAGGCCCACCTGGCGACAACTTCTCTTCTAGACTCCTTGGTTTTGCCAAGTCTATGAACATCAACTTGCAGATAAACAGGCTAGACAATCATCCATTACAGAATCTAAACGCCCAAATTCTTGATGTCTCGCCAGATGAAACCTTTGTTGTATGTGCACAATTTAGGCTGCACCACCTGAATCACAGCACTCCTGATGAACGTAGTGAATTTCTCAAGGTTCTGTGGAACATGAAGCCCAAGGGGGTGGTACTAAGCGAGAACAACATGGACTGTTGCTGCAATAGTTGTGGGAATTTCGCCACCGGATTTGAGCGAAAAGTGGAGTTCTTATGGAAGTTTTTGGATTCCATAAGCTCGGCATTCAAGGGAAAAGAGAGTGAGGACAGGAGACTAATGGAAGGAGAGGCCGCAAAAGCATTGACAAACCAGCGTGAGATGAATGAAGGAAAAGAGAAATGGTGTGATAGAATGAGAGAAGCAGGGTTTGTAGGGGAGAATTTTGGCGAGGACGCGATTGATGGAGCTCGAGCTCTGTTGAGGAAGTATGATAATAACTGGGAGATGAAAGTAGAAGAGAACCATACCAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTACTTTGTGGAAGCTAAACAAGAACGACAAGGGTGGATCGGCTTCATCATTGACACAGGTCGGCTTTAAGTGA 1788 0.4609 MIPHAPSKFFIVHSFNLSFRFLDYIRKVTMEPPNPASDHILDWFEGSVSYYPSWMDDPYNPGCIVEDYNLWGHGQDMGQQFHVDAGTGSPDAATGTAMSAAISGGKTPTEPYSSNKPPSSDLSKKRNDSDDLCLKPSQNHKSKKIKCRPANEADNGDAVVEGTTVKKSAGNKKGSAKANGNNCNNGNNKEGRWAEQLLNPCALALATGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRALTQHLSSSTSFSSTTASSGPVTFASADPRFFQRSLLKFYEVSPWFAFPNNIANSSILQILAEESNSLQTLHIIDIGVSHGFQWPTFLEALTRRPGGPPPLVRLTVVTASAENDQNMETPFAIGPPGDNFSSRLLGFAKSMNINLQINRLDNHPLQNLNAQILDVSPDETFVVCAQFRLHHLNHSTPDERSEFLKVLWNMKPKGVVLSENNMDCCCNSCGNFATGFERKVEFLWKFLDSISSAFKGKESEDRRLMEGEAAKALTNQREMNEGKEKWCDRMREAGFVGENFGEDAIDGARALLRKYDNNWEMKVEENHTSVGLWWKGQPVSFCTLWKLNKNDKGGSASSLTQVGFK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0590 595 MobiDBLite consensus disorder prediction 168 187 - -
Prci13g0590 595 MobiDBLite consensus disorder prediction 121 138 - -
Prci13g0590 595 Pfam GRAS domain family 195 576 IPR005202 -
Prci13g0590 595 MobiDBLite consensus disorder prediction 92 120 - -
Prci13g0590 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 564 IPR005202 -
Prci13g0590 595 MobiDBLite consensus disorder prediction 83 187 - -
Prci13g0590 595 ProSiteProfiles GRAS family profile. 185 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0590 Prci-Chr13 4774264 4776427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0590 31 576 GRAS Transcription Factor Family AT3G13840 50.995 2.05e-174 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci13g0590 GRAS 7.3e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0590 - - mtr:11434050 776.933