Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0548 ATGTCGAAATTCCCCGACCCGGCGGCGGATAGCCGGAGGCCTGGCAAGTCGTCGGAAAGGTCCAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGCGAGAGTCTGGATCTTTAAGCCTTCGAATGGCTGGAAAAATGGAATCTAGAGCAATTACGAAGGACTTGAAGACAAACCTGGAAGATCCTGATGATACATTGAGACTTAATGCTTCAGCTATGGAATGTCTTCCACAGTTCGTGGAAAACGCCTGCATCAAGAAATCTGATTCGAGGTCAGACCCTGAACCCCAATTGACGATATTTTATGCTGGAAAAGTGTTAGTGTTCGATGCTTTTGCTCCTGAGAAGGCCACGGAGATCATGGAGCTAGCCACCAAATTAAGCTCTGATAGCACTAATTCTGACATTAACAAGAACCTCCCCAGTGCTTCTACTGTTAAAGAAAATCAGGATGTGGCCAAAGTGCCTCAAGACAACACTGCTAAGGAACAGGCAGTCCTTAAACCAGGACCCCCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAATTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAGCAATCCAAATAATCCGAAGCCTGATGGAAGCAGTTCAGGAGGAGACCCTGATCAAGGCCAGGGTTCCAAATCATTTGACCTTAACATGTAG 723 0.4564 MSKFPDPAADSRRPGKSSERSNFTQYCNVLSQLLKEKRESGSLSLRMAGKMESRAITKDLKTNLEDPDDTLRLNASAMECLPQFVENACIKKSDSRSDPEPQLTIFYAGKVLVFDAFAPEKATEIMELATKLSSDSTNSDINKNLPSASTVKENQDVAKVPQDNTAKEQAVLKPGPPPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLSNPNNPKPDGSSSGGDPDQGQGSKSFDLNM 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0548 240 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Prci13g0548 240 MobiDBLite consensus disorder prediction 135 162 - -
Prci13g0548 240 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 215 IPR040390 -
Prci13g0548 240 MobiDBLite consensus disorder prediction 208 240 - -
Prci13g0548 240 MobiDBLite consensus disorder prediction 1 22 - -
Prci13g0548 240 Pfam Jas motif 187 209 IPR018467 -
Prci13g0548 240 Pfam tify domain 101 129 IPR010399 -
Prci13g0548 240 MobiDBLite consensus disorder prediction 135 186 - -
Prci13g0548 240 SMART tify_2 96 131 IPR010399 -
Prci13g0548 240 MobiDBLite consensus disorder prediction 203 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0548 Prci-Chr13 4267820 4270973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0548 17 223 Tify Gene Family AT1G19180 34.298 1.29e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci13g0548 tify 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0548 K13464 - gmx:100778559 238.039