Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0535 ATGGCGAATGGAGAAGAGAAAGGCAATGACTTCTATGCAGTTATGGGATTGGATAAGGAGTGCACAGAATTAGAGCTCAGGAATGCTTATAAGAAACTCGCAATGAAATGGCACCCAGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAGGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCTGTTTTATCTGATGCCAATAAGAGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGAATTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAAGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGACATGTTTCAAGGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTAGTTCTACTTCGTCCACGACAACTACGTACATGACTTACTCCGAAAGTTCCGGTTCTAACAAACGCAATTCCTCGGAGATGAACGTTGGGAAGAATGTGGATTCCTCTGACTTTGAGGCCACCCTCCAGGACTTCTGTTTAGGGGTGGATCGGCTACAAGACATAAAGGAGGGAGGAGGTGTGCGAGGAAGAGGTAGCAGTAGACGTAGACATGGTCGGAAGCAAAAGGTGGCATCTGGGCATGATGTCTCCTCCACCAGTGACTTGTCCAGTGTATCTGCATAG 711 0.4627 MANGEEKGNDFYAVMGLDKECTELELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGEFLNEMAAMMSQTKPNENGEESFEELQQLFEDMFQGDIGCSGSDSHTAASSSTSSTTTTYMTYSESSGSNKRNSSEMNVGKNVDSSDFEATLQDFCLGVDRLQDIKEGGGVRGRGSSRRRHGRKQKVASGHDVSSTSDLSSVSA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0535 236 CDD DnaJ 10 70 IPR001623 -
Prci13g0535 236 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Prci13g0535 236 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Prci13g0535 236 MobiDBLite consensus disorder prediction 221 236 - -
Prci13g0535 236 Gene3D DnaJ domain 7 138 IPR036869 -
Prci13g0535 236 MobiDBLite consensus disorder prediction 198 236 - -
Prci13g0535 236 MobiDBLite consensus disorder prediction 133 174 - -
Prci13g0535 236 Pfam DnaJ domain 10 78 IPR001623 -
Prci13g0535 236 SMART dnaj_3 9 73 IPR001623 -
Prci13g0535 236 PRINTS DnaJ domain signature 30 45 IPR001623 -
Prci13g0535 236 PRINTS DnaJ domain signature 12 30 IPR001623 -
Prci13g0535 236 PRINTS DnaJ domain signature 53 73 IPR001623 -
Prci13g0535 236 PANTHER PUTATIVE, EXPRESSED-RELATED 2 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0535 Prci-Chr13 4126954 4131173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0535 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.24e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0535 - - lang:109338829 263.462