Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0495 ATGGGTGACTCGTTCATGTCTAATGACAAATTGAGCGAATCTCCCGCAGTTGAAGTGACGGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTGTGTTTGTTCTGTTCCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACTCCTCCGCCGCCTCGCCGTCGCCGTCGACGCCGCTTTGTCTTCGCCCCAGGGCAAGATCCGGCTATTTACGGCGGTCAGAGCGGCGGACTCGACCCTTCAGTGCTTTTGTCCTTACCCGTATTGGTGTACCAACCTGAAAATTTCAAAGATGGTTTAGAATGTGCTGTTTGTCTCTCTGAGCTTGTCCAAGGAGAAAAGGCGAGGCTTTTACCCAAATGCAACCATGGGTTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCTACTTGCCCACTGTGCAGAAACCCAGTTGCTTCTGAAACCCCTAAATGCAATAGCAGTTCAAGTGTTCGTGAAAATTCCGCAGAGAATATTACTAGTCAGTCACAAGCATCAGAAAATTTTCAAAATTCAGCTTTAGCTGCCGGGAGTGGTTCAGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAATCAGACTCAAGTTAGTTCTATCAACACTTCTTCAGAAGAAGAGAGTCCTTCATCTTCTACCACAGCTAGCAGTAGCAGTAATAATAGACGCCATGAAATGATGGTGATTGATATACCAAGTGAGGTCAATTCTTCGTCTTTATCTCCTTCTGCAAACAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGACTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGCCATTTGCAAATTATAGAAGAGAGTCAATAG 900 0.4456 MGDSFMSNDKLSESPAVEVTGKIMVLAIIILFMVVVFVLFLHLYAKWFWWSIEETTPPPPRRRRRRRFVFAPGQDPAIYGGQSGGLDPSVLLSLPVLVYQPENFKDGLECAVCLSELVQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVASETPKCNSSSSVRENSAENITSQSQASENFQNSALAAGSGSESPNFPTNVLVWGNQTQVSSINTSSEEESPSSSTTASSSSNNRRHEMMVIDIPSEVNSSSLSPSANRFAEDELKSPMTTRLRSLKRLLSRDKSHLQIIEESQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0495 299 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 263 - -
Prci13g0495 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 161 IPR013083 -
Prci13g0495 299 MobiDBLite consensus disorder prediction 216 241 - -
Prci13g0495 299 SMART ring_2 110 151 IPR001841 -
Prci13g0495 299 FunFam RING-H2 finger protein ATL3 79 157 - -
Prci13g0495 299 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Prci13g0495 299 CDD RING-H2_EL5-like 109 152 - -
Prci13g0495 299 SUPERFAMILY RING/U-box 93 159 - -
Prci13g0495 299 MobiDBLite consensus disorder prediction 157 183 - -
Prci13g0495 299 Pfam Ring finger domain 109 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0495 Prci-Chr13 3794135 3795888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0495 1 291 C3H Transcription Factor Family AT1G53820 44.904 8.12e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0495 - - qsa:O6P43_027473 308.531