Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0491 ATGGCACCCGATCACGAAGAGGACATCAAGGACGAGAAGAACCCCCGTCCCCTCGACGAGGATGACATTGCCCTGCTCAAAACCTATGGTCTGGGACCTTATTCCACAGGTATAAAAAAGGTGGAGAAGGAGATCAAAGAGATGGCAAAGAAAGTCAATGATTTATGCGGTATTAAGGAGTCTGATACTGGTCTAGCTGCACCAAGTCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGGCCAGGTGCACAAAGATAATAAATCCAAATTCTGAAGATGCTAAATATGTTATCAATGTTAAGCAGATTGCAAAGTTTGTTGTTGGGCTGGGTGACAAAGTTTCCCCTACTGACATAGAGGAAGGAATGCGCGTTGGGGTTGATAGAAATAAATACCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGCGTTACCATGATGACAGTGGAAGAGAAGCCAGATGTGACATATAATGATGTTGGTGGCTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTTAAGCTTGGAATTGATCCTCCAAAGGGTGTTCTCTGTTATGGTCCACCAGGAACTGGAAAAACACTTTTGGCCAGGGCCGTGGCTAATAGAACTGATGCTTGTTTCATTAGGGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTATTTCAGATGGCCCGATCAAAGAAGGCATGTATTGTATTTTTTGATGAAGTCGATGCAATTGGAGGTGCCCGTTTTGATGATGGTGTTGGTGGGGACAATGAGGTTCAGCGCACGATGCTTGAAATCGTGAATCAGCTTGATGGCTTTGATGCTCGTGGAAACATCAAAGTTTTGATGGCAACAAACAGGCCTGATACTCTAGATCCTGCCCTACTTCGACCTGGGCGTTTGGATCGTAAGGTCGAGTTTGGTCTCCCTGATTTAGAGAGCAGGACCCAGATATTCAAGATACACACAAGAACCATGAACTGTGAGAGGGATATCCGATTTGAACTTCTTGCTCGCCTTTGTCCAAATTCCACAGGAGCTGATATAAGGAGTGTATGCACTGAAGCTGGTATGTATGCCATCCGTGCCCGAAGGAAGACTGTAACAGAGAAAGATTTCCTGGATGCAGTGAATAAAGTCATTAAAGGGTACCAAAAGTTCAGTGCAACTCCCAAGTACATGGTCTACAACTGA 1281 0.4465 MAPDHEEDIKDEKNPRPLDEDDIALLKTYGLGPYSTGIKKVEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0491 426 CDD RecA-like_PAN_like 166 336 - -
Prci13g0491 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 416 IPR027417 -
Prci13g0491 426 Gene3D - 158 337 IPR027417 -
Prci13g0491 426 Gene3D - 339 420 - -
Prci13g0491 426 Gene3D - 33 157 IPR012340 -
Prci13g0491 426 ProSitePatterns AAA-protein family signature. 308 326 IPR003960 GO:0005524|GO:0016887
Prci13g0491 426 FunFam 26S protease regulatory subunit 7 158 337 - -
Prci13g0491 426 Pfam AAA+ lid domain 360 403 IPR041569 -
Prci13g0491 426 FunFam 26S protease regulatory subunit 7 33 157 - -
Prci13g0491 426 SMART AAA_5 201 340 IPR003593 GO:0016887
Prci13g0491 426 FunFam 26S protease regulatory subunit 7 339 410 - -
Prci13g0491 426 Pfam ATPase family associated with various cellular activities (AAA) 205 337 IPR003959 GO:0005524|GO:0016887
Prci13g0491 426 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 7 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0491 Prci-Chr13 3758024 3762498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0491 170 391 Calmodulin-binding Proteins AT3G56690 37.220 1.74e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0491 K03061 - jre:109021415 848.58