Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0490 ATGATGGAGGATCGGGGAGTTTTGGCGGTGGTGTTCACCAGCACCTGCATTCTGGGTTGGTTGCTCATTGCCGTCAATGGAGACACAGATCAAACTGATGCTTCTGCTTTACGGGCTATGTTTATTGGTATGAACTCACCATCCCAACTAGGTTGGTCAGCAAACGGTGGTGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCTGGCAACAGAGTTACCGAGATTAAGTTGCCTAGTCTTGGACTGTCTGGATCATTCGGTTTCCAGTTACAAACCATGACATTTGTGACCACCCTTGATATGAGTTACAATAATTTTGGAGGCAACATACCATACCAACTTCCACAAAATTTGCAGAGATTAGATCTTTCCAATAACCAGTTCACTGGGAGTTTACCATATTCAATTTCTGATATGACTTCTCTTACATACCTAAATATTGCTCACAATCAACTACAGAATGGACTGGGTGACATGTTTCAAAAGCTTTCTAAGCTAGCCACATTGGATCTCTCTTTCAATTCTCTGTCAGGTAGCCTCCCTCAGAGTTTTAGCTCGCTTTCAAGTGTGAGCAGCATGTATCTGCAAAACAACCAGTTTACAGGGGCTATTGATGTCCTCGCCAATCTGCCTCTTGATAGTCTGAATGTGCAAAACAACCATTTTACAGGCTGGATACCAGAACAGCTGAAAAGCATTAACCTCCAGACATCAGGAAATGCATGGAACTCAGGTCCTGCCCCCCCTCCACCTCCTGGGACGCCTCCTGCAAGTGGAAGGAACCGTCATCACAAATCTGATGGAAGTAATAGCTCTTCAGATGGTGGCACCAGTGATGGGGAGAAAAAATCTGGTATAGGAGCTGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCAGTAGTTGCTTTCTTTTTGGTGAAAAGAAAATCCAGAAAGTCATCTTCTGATATAGAAAAGCTTGACAATGAGCCTTTTGCTCCTCTTAATTCAAACGAAGTGCATGAAGTGAAGTCTGTGCAAGCTCCCTCTGTAGTTGACATGAAGACATTTGATACTTCTGCTTCAATAAATATTAAACCCCCACCTATTGAACGTCACAAATCATTTGATGAAGACGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCTGTGAATGTGAAATCATATTCTATAGCAGACCTACAGATTGCCACTGGGAGCTTCAGTATGGATCACCTTCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGATGATGGGAAGGTTCTTGCTGTGAAGAAAATTGATTCATCGATCCTGCCCCATGATTCCGAAGATTTTATAGAATTAGTCTCAAAAATCTCCAACTTACACCATCCAAATGTGACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGTGGATCATTGCATGACTTCCTTCACTTATCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCGTCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGCGGAGCTCAATCCTCATGTCTCGGACTCAGGATTGGCAAGCTATATTCCAAATGCGGACCAGGTCTTGAACCGTAATGCTGGATTTGGGTATGATGCACCTGAAGTTGCTTTGTCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGACCAAGATCTGAGCAATCTTTGGTACGATGGGCAACACCTCAACTCCATGACATTGATGCGTTGGCTAAAATGGTTGATCCTGCTCTGGAGGGGCTGTACCCCGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCTCTCTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCAGAGGTGGTTCAAGCATTGGTTCGGTTAATGCAGCGAGCTAACATGAGCAAGAGGACATTTGGAACTGATCAAGGAGGATCCAATCGAGGAGGCGATGATCAAGACACACAAGATATGTAA 2151 0.4338 MMEDRGVLAVVFTSTCILGWLLIAVNGDTDQTDASALRAMFIGMNSPSQLGWSANGGDPCGQSWKGITCSGNRVTEIKLPSLGLSGSFGFQLQTMTFVTTLDMSYNNFGGNIPYQLPQNLQRLDLSNNQFTGSLPYSISDMTSLTYLNIAHNQLQNGLGDMFQKLSKLATLDLSFNSLSGSLPQSFSSLSSVSSMYLQNNQFTGAIDVLANLPLDSLNVQNNHFTGWIPEQLKSINLQTSGNAWNSGPAPPPPPGTPPASGRNRHHKSDGSNSSSDGGTSDGEKKSGIGAGGIAGIVISILLVGAVVAFFLVKRKSRKSSSDIEKLDNEPFAPLNSNEVHEVKSVQAPSVVDMKTFDTSASINIKPPPIERHKSFDEDEFSKKPIIVKKTVKAPVNVKSYSIADLQIATGSFSMDHLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSEDFIELVSKISNLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHVSDSGLASYIPNADQVLNRNAGFGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLMQRANMSKRTFGTDQGGSNRGGDDQDTQDM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0490 716 Gene3D Ribonuclease Inhibitor 30 252 IPR032675 -
Prci13g0490 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 488 - -
Prci13g0490 716 PANTHER LEUCINE RICH REPEAT KINASE 2 72 689 - -
Prci13g0490 716 SUPERFAMILY Protein kinase-like (PK-like) 395 683 IPR011009 -
Prci13g0490 716 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Prci13g0490 716 Pfam Leucine rich repeat 160 202 IPR001611 GO:0005515
Prci13g0490 716 Pfam Leucine rich repeat 118 154 IPR001611 GO:0005515
Prci13g0490 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 697 - -
Prci13g0490 716 CDD STKc_IRAK 418 686 - -
Prci13g0490 716 Pfam Leucine Rich repeat 96 110 IPR001611 GO:0005515
Prci13g0490 716 Gene3D Phosphorylase Kinase; domain 1 375 488 - -
Prci13g0490 716 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Prci13g0490 716 MobiDBLite consensus disorder prediction 694 716 - -
Prci13g0490 716 Gene3D Transferase(Phosphotransferase) domain 1 490 704 - -
Prci13g0490 716 MobiDBLite consensus disorder prediction 239 284 - -
Prci13g0490 716 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Prci13g0490 716 MobiDBLite consensus disorder prediction 694 709 - -
Prci13g0490 716 SUPERFAMILY L domain-like 40 233 - -
Prci13g0490 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Prci13g0490 716 PRINTS Leucine-rich repeat signature 165 178 - -
Prci13g0490 716 PRINTS Leucine-rich repeat signature 120 133 - -
Prci13g0490 716 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0490 Prci-Chr13 3748196 3756664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0490 1 715 Strubbelig Receptor Gene Family AT1G53730 66.713 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci13g0490 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0490 - - gmx:100780323 1051.97