Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0487 ATGGAAATGATTTTCTTTATGGAAACATCCTCCTCCTTTTATATATTAACCCATTTGTCAACGTCACGCCACTCTTTCTCTCTCTCACCTTCATTTTTCAGGGTCAAGGGATGGTCACGCCGATGCAATAATCCCCCAACATCCCAAACTCCTCTTCCTAGATTGGCCGATGACACCCATCTGTCTGCTTTCCCTCCTCCGTCTCCATCCTCCTCTTCACCTTCAAGTTCTTCATTTTACATGAAGAAAGATCCCCAAGACGACGTCTTTCCCTTGGGGGTATCTGTTCTGATGACACTTGAAGCTTCCACGCATAGAGAACGACCAAACCCGTCAACATCATCTGCTACAGGAAGACCCTCCGCCATTCTCAGGGATACGAGGTTCATGGCCTTTCTCATCGTACCGTTAGTTCTGTCTTGCCTCGTTGTCAGTGTCTCCTCCTCCTGTACCCAATTGGATAACGAGTCTCTCTTGGCCTTCTTCAGTAATATATCCACGCTTTCCTCTCACCCTCCACTTAATTGGTCTGCTTCCGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGCGATGAGGGAGATAAGGATAATGGGGATCAGCGAGTTATTGGCTTATTGCTTCCATCCAGAGGTCTCGCTGGTTCTATATCCCCTGCTCTCACGAACCTCACTGGCCTGTCTCAGCTCAATCTCTCCCGCAATCGACTTTATGGTAATCTCCCAACCCAATTCTTCACACTCCTTAATCACCTGCAGATTCTTGATTTGAGCTACAATCGTCTCTCTGATGAATTGCCAGCATCTGATCTTAATAATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGAAGCTGCAGTAGCAGCAGGGACTTTGACATCTTTTAATGTTAGCAACAATAGCTTCACAGGTCAAATTCCCACTTCTCAACTTTGCGTAAATGAAAGTCTCAGATTCTTGGATCTTTCCTACAATGATTTCAATGGTTCAATTCAATCTGGATGGGGAACTTGTTCCAAACTTGAGATTTTGCGGGCAGGTTTCAATTTTCTCACTGGGCCTCTTCCTGGTGACCTTTTTTATGCCGTTTCCCTCAGAGAGATTTCCTTGCCCCTTAATAAACTCTCTGGAAATATTGAAGATGGCATTGGTAGCCTTACCAACCTCACAGTCCTGGAGCTCTACTCCAATGATTTCAGAGGATCCATACCACGAGATATTGGCAAGCTATCCAAGCTGGAAAAGCTACTGCTTCATATAAATAATTTGACGGGTGCTTTACCCCCATCTCTAGTGAACTGTGTCAATCTCGTCGAGTTAAATTTAAGGGTCAATCTCTTGGAGGGGAATCTCGCGGAATTCAATTTTTCCCGATTCCAGCGGCTCACTACTCTTGATCTTGGCAACAATAATTTTACAGGCAATTTACCTACAACCCTTTATGCATGCAAGTCACTGGCTGCAGTAAGGCTAGCATCAAATCAGCTTGGGGGACAGATCACACCGGACATACTTGGACTTGAGTCTTTGTCTTTCCTATCAATATCTACCAACTATCTAAGAAATTTCACAGGAGCTATGAAGATACTCACCGGTCTCAAGATTAGTAGCCTCGTCCTCTCAAAGAATTTTTATGATGAAACCATCCCATATGATGAGAACTTAGTAGGCCGAGATGAATTTCAAAAACTCCAAGTTCTAGCCTTGGGTGGTTGTAATTTCACGGGTCAAATACCGGGCTGGCTTGCAAGGCTTAGGACGCTCGAGGTCATTGATCTGTCCTATAATCTCATCACTGGTTCAATTCCTCCTTGGTTGGGCACACTTCCGCAGCTATTCTACATAGACTTGTCTCATAATCACCTTACAGGAATATTTCCCACGGAACTCACAGGAATTCCAGCATTAACATCACAAGAGGCAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGAACAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCAGCAATATATCTGAGAAACAATAGTCTCCGTGGGAATATTCCCACGGAGATTGGCCTAATGAAAGTCTTGCATCAGCTGGATCTGGGTAATAACAACTTCTCTGGCAGCATTCCAGTTCAAATTTCTAGCTTGACTAATTTAGAGAAGTTAGACCTCTCAGGGAACCGACTTTCTGGTGAAATTCCTGCTTCACTCAAAAGCCTCCATTTCTTGTCATTTTTCACTGTGGCAAGCAATGATCTTCAAGGGGAGATACCAACAGGTGGTCAATTTGATACATTCTCTCCTTCCAGCTTTGCCGGAAACCCTCGATTGTGTGGTTCAGCTATACAACGCTCTTGTCCTAGTCCACAAGGTAACATTGCAACTCACCGCACTTCGAACAAAAAGATCATGATAGGACTTGTTATTGCAGCCTGTTTCGGCACTGTTTCTGTCATGATTGTGTTGGTAATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGGGGAGACCCAGACAAGATTGAACTGGAATCAATTTCTGCTTACTCCAATAGTGGTGTTCATCCTGAAGTTGATAAGGAGGCTAGCCTAGTGGTAATGTTCCCCAATAAAACAAATGAAATCAAAGATCTTAACATATTTGAGATCTTAAAAGCCACTGAAAATTTCAGTCAAGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAGGCAATGTTACCTGATGGAACTAAGCTAGCTATCAAGAAACTTTCAGGAGATATGGGGCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTATCAACAGCCCAACACGAGAATTTGGTTGCATTGCAAGGTTACTGTGTACATGATGGCTTTCGGCTTCTCATATATTCTTATATGGAAAACGGAAGCCTGGATTATTGGTTGCATGAGAAGCCTGATGGTTCAACTCAACTTGATTGGCCGACTCGACTGAAAATAGCGCGGGGAGCAAGCTGTGGATTGGCTTACATGCATCAGATATGTGAACCACACATTGTTCATCGTGATATAAAGTCAAGCAACATCCTCCTTAATGAGAAGTTTGAGGCACACGTTGCTGATTTTGGCTTGTCCCGGTTGATTCTTCCATATCACACTCATGTTACAACTGAGCTTGTAGGTACATTAGGTTATATTCCCCCTGAGTATGGACAAGCATGGGTTGCCACTCTCAGGGGAGATGTGTACAGTTTTGGGGTTGTCATGCTTGAGCTGCTCACTGGGAGGAGACCTGTTGACATAGGCAAGCCAAAAATGTCAAGGGAATTGGTTGGTTGGGTGCAACAAATGAGGAGTGAAGGAAAACAAGATGAAGTTTTCGACCCTCTTCTGAGGGGGAAGGGCTTTGAAGAGGAAATGCTGCAGGTACTTGATGTGGCCTGCCTCTGTGTCAACCTGAATCCTTTCAAGAGGCCAAGCATCAGAGAAGTCGTTGATTGGTTGAAGAATGTAGGATCAGCCAAACAACACCAGAATAAAGAGTAG 3585 0.4385 MEMIFFMETSSSFYILTHLSTSRHSFSLSPSFFRVKGWSRRCNNPPTSQTPLPRLADDTHLSAFPPPSPSSSSPSSSSFYMKKDPQDDVFPLGVSVLMTLEASTHRERPNPSTSSATGRPSAILRDTRFMAFLIVPLVLSCLVVSVSSSCTQLDNESLLAFFSNISTLSSHPPLNWSASVDCCSWEGILCDEGDKDNGDQRVIGLLLPSRGLAGSISPALTNLTGLSQLNLSRNRLYGNLPTQFFTLLNHLQILDLSYNRLSDELPASDLNNNKTSSIIQELDLSSNLFQGTLPSSFLQYLEAAVAAGTLTSFNVSNNSFTGQIPTSQLCVNESLRFLDLSYNDFNGSIQSGWGTCSKLEILRAGFNFLTGPLPGDLFYAVSLREISLPLNKLSGNIEDGIGSLTNLTVLELYSNDFRGSIPRDIGKLSKLEKLLLHINNLTGALPPSLVNCVNLVELNLRVNLLEGNLAEFNFSRFQRLTTLDLGNNNFTGNLPTTLYACKSLAAVRLASNQLGGQITPDILGLESLSFLSISTNYLRNFTGAMKILTGLKNXSSLVLSKNFYDETIPYDENLVGRDEFQKLQVLALGGCNFTGQIPGWLARLRTLEVIDLSYNLITGSIPPWLGTLPQLFYIDLSHNHLTGIFPTELTGIPALTSQEANDRIVRSYLELPVFIVPNNASQQQYNQLSNLPPAIYLRNNSLRGNIPTEIGLMKVLHQLDLGNNNFSGSIPVQISSLTNLEKLDLSGNRLSGEIPASLKSLHFLSFFTVASNDLQGEIPTGGQFDTFSPSSFAGNPRLCGSAIQRSCPSPQGNIATHRTSNKKIMIGLVIAACFGTVSVMIVLVIWILSKRRINPGGDPDKIELESISAYSNSGVHPEVDKEASLVVMFPNKTNEIKDLNIFEILKATENFSQANIIGCGGFGLVYKAMLPDGTKLAIKKLSGDMGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYSYMENGSLDYWLHEKPDGSTQLDWPTRLKIARGASCGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDIGKPKMSRELVGWVQQMRSEGKQDEVFDPLLRGKGFEEEMLQVLDVACLCVNLNPFKRPSIREVVDWLKNVGSAKQHQNKE 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0487 1195 Gene3D Phosphorylase Kinase; domain 1 873 986 - -
Prci13g0487 1195 FunFam Leucine-rich repeat receptor-like kinase 156 277 - -
Prci13g0487 1195 Pfam Leucine Rich repeat 249 264 IPR001611 GO:0005515
Prci13g0487 1195 Pfam Protein kinase domain 912 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0487 1195 Gene3D Transferase(Phosphotransferase) domain 1 987 1195 - -
Prci13g0487 1195 ProSitePatterns Protein kinases ATP-binding region signature. 917 940 IPR017441 GO:0005524
Prci13g0487 1195 SUPERFAMILY Protein kinase-like (PK-like) 897 1182 IPR011009 -
Prci13g0487 1195 Pfam Leucine Rich Repeat 739 761 IPR001611 GO:0005515
Prci13g0487 1195 SUPERFAMILY L domain-like 353 795 - -
Prci13g0487 1195 Gene3D Ribonuclease Inhibitor 153 274 IPR032675 -
Prci13g0487 1195 SMART LRR_typ_2 737 761 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 428 452 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 628 651 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 404 427 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 477 501 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 223 247 IPR003591 -
Prci13g0487 1195 SMART LRR_typ_2 248 272 IPR003591 -
Prci13g0487 1195 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 374 469 - -
Prci13g0487 1195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1033 1045 IPR008271 GO:0004672|GO:0006468
Prci13g0487 1195 Gene3D Ribonuclease Inhibitor 275 372 IPR032675 -
Prci13g0487 1195 Gene3D Ribonuclease Inhibitor 373 473 IPR032675 -
Prci13g0487 1195 ProSiteProfiles Leucine-rich repeat profile. 250 271 IPR001611 GO:0005515
Prci13g0487 1195 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Prci13g0487 1195 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 176 376 - -
Prci13g0487 1195 PRINTS Leucine-rich repeat signature 631 644 - -
Prci13g0487 1195 PRINTS Leucine-rich repeat signature 737 750 - -
Prci13g0487 1195 Pfam Leucine rich repeat N-terminal domain 154 191 IPR013210 -
Prci13g0487 1195 FunFam Leucine-rich repeat receptor protein kinase MSP1 876 986 - -
Prci13g0487 1195 FunFam Tyrosine-sulfated glycopeptide receptor 1 474 812 - -
Prci13g0487 1195 SUPERFAMILY L domain-like 176 418 - -
Prci13g0487 1195 Gene3D Ribonuclease Inhibitor 474 813 IPR032675 -
Prci13g0487 1195 ProSiteProfiles Leucine-rich repeat profile. 739 761 IPR001611 GO:0005515
Prci13g0487 1195 SMART serkin_6 911 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0487 1195 ProSiteProfiles Protein kinase domain profile. 911 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0487 1195 MobiDBLite consensus disorder prediction 43 84 - -
Prci13g0487 1195 FunFam Leucine-rich repeat receptor-like protein kinase 987 1193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0487 Prci-Chr13 3627934 3631990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0487 119 822 Miscellaneous Gene Families AT1G17250 51.676 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci13g0487 Pkinase 2.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0487 - - pcin:129290895 2313.88