Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0486 ATGACACACAGATATCCCAGACAAATGCCACCCCCATCAACATCATCAACAAGAAGACTCTCTGCCTCCCTTTCATCTTCCATAATTATGGTTCTGAGATTAGTGGCCTTTCTCATCGTACCGTTAGTTCTGTCTTGCCTCGTTGTCAGTGTCTCCTCCTCCTGTACCCAATTGGATAACGAGTCTCTCTTGGCCTTCTCCAGTAATATATCCACGCTTTCCTCTCACCCTCCACTTAATTGGTCTGCTTCCGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGTGACAAGGGAGATAAGGATAATGGGGATCAGCGAGTAATTGGCTTATTGCTTCCATCCAGAGGTCTCGCCGGTTCTATATCCCCTGCTCTCACTAACCTCACTGGCCTGTCTCAGCTCAATCTCTCCCACAATCGACTTTCTAGTAATCTCCCAACCCAATTCTTCACACTCCTTAATCACCTGCAGATTCTTGATTTGAGCTACAATCGTCTTTCCGATGAATTGCCAGCATCTGATCTTAATAATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGAAGCTGCAGCTGCAGCAGGGACCTTGACATCTTTTAATGTTAGTAACAATAGCTTCACAGGTCAAATTCCCACTTCTCAACTTTGCGTTAATGAAAGCCTCAGATTCTTGGACCTTTCCTACAATGATTTCAACGGTTCAATTCAATCTGGCTGGGGAGCATGTTCCAAACTCGAGATTTTCCGAGCGGGTTTCAATTTTCTCACTGGGCCTCTTCCTTGTGATCTTTTTGATGCTGTTTCCCTCAGAAAGATTTCCTTTCCCCTCAATAAACTCTCTGGAAATATTGATGATGGAATTGGTAGCCTTACTAACCTCACAGTCCTGGAGCTCTACTCCAATGACTTCAGAGGATCCATACCACGAGATATTGGTAAGCTATCCAAGCTGGAAAAGCTACTGCTTCAGACAAATAATTTGACAGGCAATTTACCAACAACCCTTTATGCATGCAAATCACTTGCTGCATTAAGGCTGGCATCTAATCAGCTTGCGGGACAGATCACCCCAGACATCCTTGGACTTGAGTCTCTGTCTTTCCTATCAATATCTACCAACTACCTAAGAAATTTCACAGGAGCTATGAAGATACTCACCGGCCTCAAGAACCTTAGTAGCCTTGTCCTTGCAAAAAATTTTTATAATGAAACCATCCCATATGATGAGAACTTAGTCGGCCGAGATGAATTTCAAAAACTCCAAGTTCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCGGGCTGGCTTGCAAGGCTTAGGACGCTCGAGGTCATTGATCTGTCCTATAATCTCATCACTGGTTCAATTCCTCCTTGGTTGAGCACACTTCCGCAGCTATTCTACATAGACTTGTCGCATAACCACCTTACAGGAATATTTCCCAGGGAACTCACAGGAATTCCAGCATTAACATCACAAGAGGCAAATGATAGAATAGTAAGGTCTTACATGGAGTTACCTGTCTTCATTGTGCCAAAGAGTGCTTCCCAGCTGCAGTATAATCGGCTTTCCAACCTACCACCAGCAATATATCTGAGAAACAATAGTCTCCGCGGGAATATTCCCATGGAGATTGGCCTAATGAAAGTCTTGCATCAGCTGGATCTGGGCAATAACAACTTCTCTGGCAGTATTCCAGTTCAAATTTCTAACCTGACTAATTTAGAGAAGTTAGACCTCTCAGGGAACCGACTATCTGGTGAAATTCCTGCTTCACTCAAAAGCCTTCATTTCTTGTCATTTTTCACTGTGGCAAGAAACGATCTTCAAGGAGAGATACCAATAGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTGCAGGAAACCCAAAATTATGTGGTTCACCTATTCAACGCTCTTGTCACAGTCCACCAGGTGATAGCACAACCTTGAACAAAAAGAGAACCTTGAACAAAGGTAAAGTAATTGGAATTGTCATTGCAGTTAGCTTTGCTGCCATTAGTATCATCATTGTGTTCACAATCTGGATACTTTTCAAGAGGAGGGTCAATCCAAGAGGAGATACTGATAAGATTGAACAAGAATCAACTTTTGCGGACTATAACAATGGTTTTCATCCTAAAATAGACAAGAACGCTAGCCCAGTGGTATTGTTCCCCAATAAAACAAATGAAATCAAAGATCTTACTATATCTGAGATCTTGAAAGCCACTGAAAATTTCAGTCTAGCCAACATTATAGGATCTGAGCATTTTGGTTTAGTTTATAGAGCGATCTTACCAGATGGAAATAAACTAGCCATTAAGAAACTTATAGGAGAATTGGGGCTTACGGGAAAGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCAACACAAGAATCTGGTTGCTTTGCAAGGTTATTGTGTGCATGATAGCTTTCGGCTTCTCATGTATACTTACATGGAAAATGGAAGCCTAGATTATTGGTTGCATGAGAAGGCTGACACTACATTTCAACTTGATTGGCCTACTCGAGTGAAGATAGCACGGGGTGTGAGTTGTGGGTTGGCTTACATGCATCACACATGTGTGCCACACATCGTACATGGCAATATAAAGTCAAGCAATATCCTCCTTAATGAAAATTTTGAAGCAATCATTGCTGATTTTGGGTTATCCCGGTTGATACTTCCTTATCACACTCATGTTACAACTGAACTTTTAGGTACATTAGGTTATATTCCACCTGAGTATGGACAAGCATCTGGGGCCACTCTTCAGGGAGATGTGTATAGCTTTGGGGTTTTCATGCTTGAGTTGCTCACTGGGAAGAGGCCTCTTGACATGTGCAAGACAAAAATGTCAATGGGACTGGTTCTTTGGACGCAACAAATGAGGAGTGATGGAAAACAAGATCAAGTCTTTGACCCACTTCTAAGAGGAAAGGGCTTTGAAGAGGAGTTGCTGAAGGTGCTTGATGTCGCCTGCATGTGTGTCAGCCAGAATCCTTTCAAGAGACCAAGCATGAGAGAAGTTGTTGATTGGTTGAAGAATGCAGGATCAGCCGAGCAACACCAGAATGAAGACAAGAGAAATGTCTGTTCTTCAACATATTTTCACAATACATACGCACACCTATGA 3216 0.4244 MTHRYPRQMPPPSTSSTRRLSASLSSSIIMVLRLVAFLIVPLVLSCLVVSVSSSCTQLDNESLLAFSSNISTLSSHPPLNWSASVDCCSWEGILCDKGDKDNGDQRVIGLLLPSRGLAGSISPALTNLTGLSQLNLSHNRLSSNLPTQFFTLLNHLQILDLSYNRLSDELPASDLNNNKTSSIIQELDLSSNLFQGTLPSSFLQYLEAAAAAGTLTSFNVSNNSFTGQIPTSQLCVNESLRFLDLSYNDFNGSIQSGWGACSKLEIFRAGFNFLTGPLPCDLFDAVSLRKISFPLNKLSGNIDDGIGSLTNLTVLELYSNDFRGSIPRDIGKLSKLEKLLLQTNNLTGNLPTTLYACKSLAALRLASNQLAGQITPDILGLESLSFLSISTNYLRNFTGAMKILTGLKNLSSLVLAKNFYNETIPYDENLVGRDEFQKLQVLALGGCNFTGQIPGWLARLRTLEVIDLSYNLITGSIPPWLSTLPQLFYIDLSHNHLTGIFPRELTGIPALTSQEANDRIVRSYMELPVFIVPKSASQLQYNRLSNLPPAIYLRNNSLRGNIPMEIGLMKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNRLSGEIPASLKSLHFLSFFTVARNDLQGEIPIGGQFDTFPPSSFAGNPKLCGSPIQRSCHSPPGDSTTLNKKRTLNKGKVIGIVIAVSFAAISIIIVFTIWILFKRRVNPRGDTDKIEQESTFADYNNGFHPKIDKNASPVVLFPNKTNEIKDLTISEILKATENFSLANIIGSEHFGLVYRAILPDGNKLAIKKLIGELGLTGKEFKAEVEALSTAQHKNLVALQGYCVHDSFRLLMYTYMENGSLDYWLHEKADTTFQLDWPTRVKIARGVSCGLAYMHHTCVPHIVHGNIKSSNILLNENFEAIIADFGLSRLILPYHTHVTTELLGTLGYIPPEYGQASGATLQGDVYSFGVFMLELLTGKRPLDMCKTKMSMGLVLWTQQMRSDGKQDQVFDPLLRGKGFEEELLKVLDVACMCVSQNPFKRPSMREVVDWLKNAGSAEQHQNEDKRNVCSSTYFHNTYAHL 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0486 1071 Gene3D Transferase(Phosphotransferase) domain 1 846 1068 - -
Prci13g0486 1071 ProSiteProfiles Leucine-rich repeat profile. 595 617 IPR001611 GO:0005515
Prci13g0486 1071 Gene3D Ribonuclease Inhibitor 209 283 IPR032675 -
Prci13g0486 1071 Gene3D Ribonuclease Inhibitor 284 358 IPR032675 -
Prci13g0486 1071 Gene3D Ribonuclease Inhibitor 56 208 IPR032675 -
Prci13g0486 1071 Pfam Leucine Rich Repeat 595 617 IPR001611 GO:0005515
Prci13g0486 1071 Pfam Protein kinase domain 773 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0486 1071 FunFam Leucine-rich repeat receptor-like kinase 60 183 - -
Prci13g0486 1071 SUPERFAMILY L domain-like 187 651 - -
Prci13g0486 1071 FunFam Tyrosine-sulfated glycopeptide receptor 1 333 667 - -
Prci13g0486 1071 Gene3D Phosphorylase Kinase; domain 1 736 845 - -
Prci13g0486 1071 SUPERFAMILY Protein kinase-like (PK-like) 754 1045 IPR011009 -
Prci13g0486 1071 ProSiteProfiles Leucine-rich repeat profile. 155 176 IPR001611 GO:0005515
Prci13g0486 1071 ProSiteProfiles Protein kinase domain profile. 770 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0486 1071 FunFam Leucine-rich repeat receptor-like protein kinase 846 1052 - -
Prci13g0486 1071 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 106 284 - -
Prci13g0486 1071 Pfam Leucine rich repeat N-terminal domain 59 96 IPR013210 -
Prci13g0486 1071 PRINTS Leucine-rich repeat signature 593 606 - -
Prci13g0486 1071 PRINTS Leucine-rich repeat signature 487 500 - -
Prci13g0486 1071 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Prci13g0486 1071 SUPERFAMILY L domain-like 81 230 - -
Prci13g0486 1071 Pfam Leucine Rich repeat 154 169 IPR001611 GO:0005515
Prci13g0486 1071 SMART LRR_typ_2 484 507 IPR003591 -
Prci13g0486 1071 SMART LRR_typ_2 153 177 IPR003591 -
Prci13g0486 1071 SMART LRR_typ_2 333 357 IPR003591 -
Prci13g0486 1071 SMART LRR_typ_2 128 152 IPR003591 -
Prci13g0486 1071 SMART LRR_typ_2 309 332 IPR003591 -
Prci13g0486 1071 SMART LRR_typ_2 593 617 IPR003591 -
Prci13g0486 1071 SMART LRR_sd22_2 153 189 - -
Prci13g0486 1071 SMART LRR_sd22_2 128 147 - -
Prci13g0486 1071 SMART LRR_sd22_2 593 619 - -
Prci13g0486 1071 SMART LRR_sd22_2 309 338 - -
Prci13g0486 1071 Gene3D Ribonuclease Inhibitor 363 668 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0486 Prci-Chr13 3602084 3605783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0486 37 701 Miscellaneous Gene Families AT1G17240 45.404 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci13g0486 Pkinase 2.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0486 - - pcin:129290895 1405.96