Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0485 ATGACACACAGATATCCCAGACAAATGCCACCCCCATCAACATCATCAACAAGAAGACTCTCTGCCTCCCTTTCATCTTCCATAATTATGGTTCTGAGATTAGTGGCCTTTCTCATCGTACCGTTAGTTCTGTCTTGCCTCGTTGTCAGTGTCTCCTCCTCCTGTACCCAATTGGATAACGAGTCTCTCTTGGCCTTCTCCAGTAATATATCCACGCTTTCCTCTCACCCTCCACTTAATTGGTCTGCTTCCGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGTGACAAGGGAGATAAGGATAATGGGGATCAGCGAGTAATTGGCTTATTGCTTCCATCCAGAGGTCTCGCCGGTTCTATATCCCCTGCTCTCACTAACCTCACTGGCCTGTCTCAGCTCAATCTCTCCCACAATCGACTTTCTAGTAATCTCCCAACCCAATTCTTCACACTCCTTAATCACCTGCAGATTCTTGATTTGAGCTACAATCGTCTTTCCGATGAATTGCCAGCATCTGATCTTAATAATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGAAGCTGCAGCTGCAGCAGGGACCTTGACATCTTTTAATGTTAGTAACAATAGCTTCACAGGTCAAATTCCCACTTCTCAACTTTGCGTTAATGAAAGCCTCAGATTCTTGGACCTTTCCTACAATGATTTCAACGGTTCAATTCAATCTGGCTGGGGAGCATGTTCCAAACTCGAGATTTTCCGAGCGGGTTTCAATTTTCTCACTGGGCCTCTTCCTTGTGATCTTTTTGATGCTGTTTCCCTCAGAAAGATTTCCTTTCCCCTCAATAAACTCTCTGGAAATATTGATGATGGAATTGGTAGCCTTACTAACCTCACAGTCCTGGAGCTCTACTCCAATGACTTCAGAGGATCCATACCACGAGATATTGGTAAGCTATCCAAGCTGGAAAAGCTACTGCTTCAGACAAATAATTTGACAGGTACTTTACCCCCATCTCTGGCGAACTGTGTCAATCTTGTCCAGTTAAATTTAAGGGTCAACCTCTTGGAGGGGAATCTTGCAGACTTTAATTTCTCAGGATTCCAGCGGCTTACTACTCTTGATCTTGGCAACAATAATTTTACAGGCAATTTACCAACAACCCTTTATGCATGCAAATCACTTGCTGCATTAAGGCTGGCATCTAATCAGCTTGCGGGACAGATCACCCCAGACATCCTTGGACTTGAGTCTCTGTCTTTCCTATCAATATCTACCAACTACCTAAGAAATTTCACAGGAGCTATGAAGATACTCACCGGCCTCAAGAACCTTAGTAGCCTTGTCCTTGCAAAAAATTTTTATAATGAAACCATCCCATATGATGAGAACTTAGTCGGCCGAGATGAATTTCAAAAACTCCAAGTTCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCGGGCTGGCTTGCAAGGCTTAGGACGCTCGAGGTCATTGATCTGTCCTATAATCTCATCACTGGTTCAATTCCTCCTTGGTTGAGCACACTTCCGCAGCTATTCTACATAGACTTGTCGCATAACCACCTTACAGGAATATTTCCCAGGGAACTCACAGGAATTCCAGCATTAACATCACAAGAGGCAAATGATAGAATAGTAAGGTCTTACATGGAGTTACCTGTCTTCATTGTGCCAAAGAGTGCTTCCCAGCTGCAGTATAATCGGCTTTCCAACCTACCACCAGCAATATATCTGAGAAACAATAGTCTCCGCGGGAATATTCCCATGGAGATTGGCCTAATGAAAGTCTTGCATCAGCTGGATCTGGGCAATAACAACTTCTCTGGCAGTATTCCAGTTCAAATTTCTAACCTGACTAATTTAGAGAAGTTAGACCTCTCAGGGAACCGACTATCTGGTGAAATTCCTGCTTCACTCAAAAGCCTTCATTTCTTGTCATTTTTCACTGTGGCAAGAAACGATCTTCAAGGAGAGATACCAATAGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTGCAGGAAACCCAAAATTATGTGGTTCACCTATTCAACGCTCTTGTCACAGTCCACCAGGTGATAGCACAACCTTGAACAAAAAGAGAACCTTGAACAAAGGTAAAGTAATTGGAATTGTCATTGCAGTTAGCTTTGCTGCCATTAGTATCATCATTGTGTTCACAATCTGGATACTTTTCAAGAGGAGGGTCAATCCAAGAGGAGATACTGATAAGATTGAACAAGAATCAACTTTTGCGGACTATAACAATGGTTTTCATCCTAAAATAGACAAGAACGCTAGCCCAGTGGTATTGTTCCCCAATAAAACAAATGAAATCAAAGATCTTACTATATCTGAGATCTTGAAAGCCACTGAAAATTTCAGTCTAGCCAACATTATAGGATCTGAGCATTTTGGTTTAGTTTATAGAGCGATCTTACCAGATGGAAATAAACTAGCCATTAAGAAACTTATAGGAGAATTGGGGCTTACGGGAAAGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCAACACAAGAATCTGGTTGCTTTGCAAGGTTATTGTGTGCATGATAGCTTTCGGCTTCTCATGTATACTTACATGGAAAATGGAAGCCTAGATTATTGGTTGCATGAGAAGGCTGACACTACATTTCAACTTGATTGGCCTACTCGAGTGAAGATAGCACGGGGTGTGAGTTGTGGGTTGGCTTACATGCATCACACATGTGTGCCACACATCGTACATGGCAATATAAAGTCAAGCAATATCCTCCTTAATGAAAATTTTGAAGCAATCATTGCTGATTTTGGGTTATCCCGGTTGATACTTCCTTATCACACTCATGTTACAACTGAACTTTTAGGTACATTAGGTTATATTCCACCTGAGTATGGACAAGCATCTGGGGCCACTCTTCAGGGAGATGTGTATAGCTTTGGGGTTTTCATGCTTGAGTTGCTCACTGGGAAGAGGCCTCTTGACATGTGCAAGACAAAAATGTCAATGGGACTGGTTCTTTGGACGCAACAAATGAGGAGTGATGGAAAACAAGATCAAGTCTTTGACCCACTTCTAAGAGGAAAGGGCTTTGAAGAGGAGTTGCTGAAGGTGCTTGATGTCGCCTGCATGTGTGTCAGCCAGAATCCTTTCAAGAGACCAAGCATGAGAGAAGTTGTTGATTGGTTGAAGAATGCAGGATCAGCCGAGCAACACCAGAATGAAGACAAGAGAAATGTCTGTTCTTCAACATATTTTCACAATACATACGCACACCTATGA 3363 0.4243 MTHRYPRQMPPPSTSSTRRLSASLSSSIIMVLRLVAFLIVPLVLSCLVVSVSSSCTQLDNESLLAFSSNISTLSSHPPLNWSASVDCCSWEGILCDKGDKDNGDQRVIGLLLPSRGLAGSISPALTNLTGLSQLNLSHNRLSSNLPTQFFTLLNHLQILDLSYNRLSDELPASDLNNNKTSSIIQELDLSSNLFQGTLPSSFLQYLEAAAAAGTLTSFNVSNNSFTGQIPTSQLCVNESLRFLDLSYNDFNGSIQSGWGACSKLEIFRAGFNFLTGPLPCDLFDAVSLRKISFPLNKLSGNIDDGIGSLTNLTVLELYSNDFRGSIPRDIGKLSKLEKLLLQTNNLTGTLPPSLANCVNLVQLNLRVNLLEGNLADFNFSGFQRLTTLDLGNNNFTGNLPTTLYACKSLAALRLASNQLAGQITPDILGLESLSFLSISTNYLRNFTGAMKILTGLKNLSSLVLAKNFYNETIPYDENLVGRDEFQKLQVLALGGCNFTGQIPGWLARLRTLEVIDLSYNLITGSIPPWLSTLPQLFYIDLSHNHLTGIFPRELTGIPALTSQEANDRIVRSYMELPVFIVPKSASQLQYNRLSNLPPAIYLRNNSLRGNIPMEIGLMKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNRLSGEIPASLKSLHFLSFFTVARNDLQGEIPIGGQFDTFPPSSFAGNPKLCGSPIQRSCHSPPGDSTTLNKKRTLNKGKVIGIVIAVSFAAISIIIVFTIWILFKRRVNPRGDTDKIEQESTFADYNNGFHPKIDKNASPVVLFPNKTNEIKDLTISEILKATENFSLANIIGSEHFGLVYRAILPDGNKLAIKKLIGELGLTGKEFKAEVEALSTAQHKNLVALQGYCVHDSFRLLMYTYMENGSLDYWLHEKADTTFQLDWPTRVKIARGVSCGLAYMHHTCVPHIVHGNIKSSNILLNENFEAIIADFGLSRLILPYHTHVTTELLGTLGYIPPEYGQASGATLQGDVYSFGVFMLELLTGKRPLDMCKTKMSMGLVLWTQQMRSDGKQDQVFDPLLRGKGFEEELLKVLDVACMCVSQNPFKRPSMREVVDWLKNAGSAEQHQNEDKRNVCSSTYFHNTYAHL 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0485 1120 Pfam Leucine Rich repeat 154 169 IPR001611 GO:0005515
Prci13g0485 1120 Pfam Protein kinase domain 822 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0485 1120 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 279 374 - -
Prci13g0485 1120 SMART LRR_sd22_2 153 189 - -
Prci13g0485 1120 SMART LRR_sd22_2 642 668 - -
Prci13g0485 1120 SMART LRR_sd22_2 128 147 - -
Prci13g0485 1120 SMART LRR_sd22_2 309 338 - -
Prci13g0485 1120 FunFam Leucine-rich repeat receptor-like kinase 60 182 - -
Prci13g0485 1120 Gene3D Ribonuclease Inhibitor 279 378 IPR032675 -
Prci13g0485 1120 SUPERFAMILY Protein kinase-like (PK-like) 803 1094 IPR011009 -
Prci13g0485 1120 Gene3D Phosphorylase Kinase; domain 1 785 894 - -
Prci13g0485 1120 ProSiteProfiles Protein kinase domain profile. 819 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0485 1120 FunFam Tyrosine-sulfated glycopeptide receptor 1 379 716 - -
Prci13g0485 1120 Gene3D Transferase(Phosphotransferase) domain 1 895 1117 - -
Prci13g0485 1120 SUPERFAMILY L domain-like 54 300 - -
Prci13g0485 1120 Gene3D Ribonuclease Inhibitor 179 278 IPR032675 -
Prci13g0485 1120 Pfam Leucine rich repeat 487 546 IPR001611 GO:0005515
Prci13g0485 1120 FunFam Leucine-rich repeat receptor-like protein kinase 895 1101 - -
Prci13g0485 1120 Gene3D Ribonuclease Inhibitor 58 178 IPR032675 -
Prci13g0485 1120 ProSiteProfiles Leucine-rich repeat profile. 155 176 IPR001611 GO:0005515
Prci13g0485 1120 PRINTS Leucine-rich repeat signature 642 655 - -
Prci13g0485 1120 PRINTS Leucine-rich repeat signature 536 549 - -
Prci13g0485 1120 ProSiteProfiles Leucine-rich repeat profile. 644 666 IPR001611 GO:0005515
Prci13g0485 1120 Pfam Leucine Rich Repeat 644 666 IPR001611 GO:0005515
Prci13g0485 1120 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 106 284 - -
Prci13g0485 1120 SUPERFAMILY L domain-like 241 700 - -
Prci13g0485 1120 Gene3D Ribonuclease Inhibitor 379 716 IPR032675 -
Prci13g0485 1120 SMART LRR_typ_2 382 406 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 153 177 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 333 357 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 642 666 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 533 556 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 128 152 IPR003591 -
Prci13g0485 1120 SMART LRR_typ_2 309 332 IPR003591 -
Prci13g0485 1120 Pfam Leucine rich repeat N-terminal domain 59 96 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0485 Prci-Chr13 3602084 3605783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0485 14 759 Miscellaneous Gene Families AT1G17250 50.066 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci13g0485 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0485 - - pcin:129290895 1783.46