Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0470 ATGTTAGCTCCTGTTCTTTTAGGAGTACTTCTTGCGTGCTTGCCTTTTTCTTGTGATTCCTTTCAGAACCAAGAAAAGGTGCTCCAATCATCATCTACTAATTTGCCTTCCAATTCCTGCAACGAAACATGTGGGAAACACCGTGTTCCTTTTCCATTCTACGTGAACTCGTCTTGTGTGTCAATTTCTCATGCTTTCAATCTCTCTTGCGCAAATTCCTCTTCCCTATTGCTCAGAATCGGCTCAGAGAACTACCCAGTGATTGAATTCTTCCCTGATGGTGTACTGGTGGACTTCCCAGGCACATTATCGTGTCGTCAGTATAATGACCTGAACTCGTTTGGCAAAAGTTTTGTGAGGAATGAGCACTTTGGGGTCTCAGTGGATAATGTCATTGGTCTCTATGACTGTGAGGATTCTTCTCTCTGTAAAGCAGATTGTGAAACAGTTGATTTGCCAGGTTGTGATGGGAACGGTGATGGTGGAGGTGGGTCACTTGGGTGTTGCTATCCACTTTCAGACCGTAGCATATGGCATGTAGGGGAAGGATTTTCAGTGTTTTCTAAGTATGGATGCAGGGGATTTTCTAGTTGGGCCGTTCTGAGAGGGTCAAATTCAGGAAAGCGTGGGGTCAAATTGGAATGGGCTATTCCTAAGAACACATCCAAGGAAGTTTGCTCAAGCAATGCTGAATTGGTGAATGCTACATCAGTTGAAGGTGGAGCAAGGTGTGTGTGTCAAGATGGGTATGTTGGTGATGGATTTGCAAATGGAACTGGATGCTTGCAGGCCTGTGTCAAGAATGGACAGGAAGCATATGGCAGCGACTGCTGTATCAGAAGAAAAGATCAAAGAAAATTTGTCATCATCGCTGGAATCCTTGGTCCAGTCCTTATTGTTGCCTCCTTGTCAGCACTATTTTACGTACTTAAAAGACCACAAAAACCAGGCACGTTTGACACAGATCAGGCTTACTATCGCAACACCTCCTTTCAAAAGTCATGTAGAACTCAGTTGTTCAGCCTCCATGAGCTAGAGGAAGCGACCGAAGGTTTCTCTGAGGATCAAAAACTCATGCACAGCAGCAACAATGGCACAATTTTCTCTGGAGTTCTTGGGGATGGATCACATGCAGCTGTCCACAAGTTGCAATATGATACTGAGAAAGACCTTATTCAAGTCTTAGCGCAAATTGAGGTTCTTTCTGCTATTGTTCATAAGAATTTGGCCCGCCTTCTCGGATGCTGTATAGACTCTGGCTATCCTTCTTTGGTTGTGTATGAGTATCCTGCAAACGGTACCTTGAAGGACCATTTACATCAAAGAATGGGCCATATGTGTTTGGACTGGAACAAGAGATTGACTATTGCTGCAGAAACTGCTTGTGTTCTTGCATTCTTACAGTATGATAACTCTCCTCCCATATTCCACCACAACCTTAAACCTGGCTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTCAGGCTAGTCAATGCCAAATTCAACTATCGCTATGATAACAACAAAGAAGGCTTGCACTTCTGCAAGAATGATGTTTATGACATGGGCGTGTTGCTCCTTGAGATCATTTCAGGCTCAAATAATCACTTGAACTCACCAACTCAAGCGCTTCAAAAGATTAGGTCAGGGAAGCTCGAAGAAATCATCGATCCGCTCCTTTACTACCACGAACAACCTCGTTGCTGCCAAGAACAGATACAGATAATAGCAGACCTTGCAACAAGATGTTTGTTGTTTGGTGCTGATGGAAAAATGGGGATGATTGATGTTGCGAGGGAATTGACACACATAACAAAAGAGGGTGTCGGTGTTGGCGTGGATGGAGGAATCACCAGAGGACCTGCTTTGGAAGAGACATTCTCAAATTCTAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGCATGTACCTTGA 1953 0.4373 MLAPVLLGVLLACLPFSCDSFQNQEKVLQSSSTNLPSNSCNETCGKHRVPFPFYVNSSCVSISHAFNLSCANSSSLLLRIGSENYPVIEFFPDGVLVDFPGTLSCRQYNDLNSFGKSFVRNEHFGVSVDNVIGLYDCEDSSLCKADCETVDLPGCDGNGDGGGGSLGCCYPLSDRSIWHVGEGFSVFSKYGCRGFSSWAVLRGSNSGKRGVKLEWAIPKNTSKEVCSSNAELVNATSVEGGARCVCQDGYVGDGFANGTGCLQACVKNGQEAYGSDCCIRRKDQRKFVIIAGILGPVLIVASLSALFYVLKRPQKPGTFDTDQAYYRNTSFQKSCRTQLFSLHELEEATEGFSEDQKLMHSSNNGTIFSGVLGDGSHAAVHKLQYDTEKDLIQVLAQIEVLSAIVHKNLARLLGCCIDSGYPSLVVYEYPANGTLKDHLHQRMGHMCLDWNKRLTIAAETACVLAFLQYDNSPPIFHHNLKPGCIFLDDDFSVKIAGFRLVNAKFNYRYDNNKEGLHFCKNDVYDMGVLLLEIISGSNNHLNSPTQALQKIRSGKLEEIIDPLLYYHEQPRCCQEQIQIIADLATRCLLFGADGKMGMIDVARELTHITKEGVGVGVDGGITRGPALEETFSNSSLLQMISMSPDSMHVP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0470 650 Gene3D Transferase(Phosphotransferase) domain 1 431 614 - -
Prci13g0470 650 Pfam Protein tyrosine and serine/threonine kinase 361 535 IPR001245 GO:0004672|GO:0006468
Prci13g0470 650 SUPERFAMILY Protein kinase-like (PK-like) 333 605 IPR011009 -
Prci13g0470 650 Pfam Wall-associated receptor kinase galacturonan-binding 40 89 IPR025287 GO:0030247
Prci13g0470 650 Gene3D Phosphorylase Kinase; domain 1 323 429 - -
Prci13g0470 650 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 608 IPR045274 GO:0007166
Prci13g0470 650 ProSiteProfiles Protein kinase domain profile. 353 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0470 650 Gene3D Laminin 223 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0470 Prci-Chr13 3504454 3508329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0470 40 612 Receptor kinase-like Gene Family AT2G23450 30.065 1.66e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Prci13g0470 PK_Tyr_Ser-Thr 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0470 - - vra:106760020 899.427