Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0469 ATGGACGCATACTCTTCTGGAGAAGAAGTTGTCGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATGATAAGTTCCTAGAAGCGCTAAAGCTCTATGGAAGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAAGGTGTTCCAATCAGACAATCTATTGACATAGACATACCTCCTCCACGCCCCAAAAGAAAACCAAACAATCCTTATCCTCGGAAGACTAGTGCTTGTGCCCAGACATCACATGGTGGAGGAAAGAATGGAAAACTTGTGCCAGTTTCATCTTCACACTGTAAACCAGCACTGGACCTGGAGAAGGAACCACATCCAGAGGAGGCACCCTGTTCCTTAGTTACATCAGCAGACAAGAATTCAATGTCAGTGCCACTGAGAAGTCCATGCACCTTAAGGGAGTTCATACCCTCAGCAAAAGAATTGATAAGCCGGGATGAAACAGATGAATCTTTTGTCACCACTGAGCTAAAAGAAAATCAGAAGTTGGAAATAGGTGCTGAAGGGAAACGCACAGAACAGAGTAATGGCACAGGTAAAGCTTCTAAGTTGGAAGATTCTGATGCTTCACATGCAAAATCGGTTCAGAGTAAGAAAACAGATTATCTCAATTGTGCTTTGACAATAGAAGGGATGCAAGGAAATCATAACTACCCTAGACATGTCCATGTGCACGTTCTTGATGGGAAAATTGGAACAGGTACTCAAAATCCTTCCCAGGGTATGTTGTTTCCAGAATCCATGTTTCAGCCCATGGGTGGGGTTAACGGGCAACCTAATATTTTCGCAAATGCAGCTGCATCAAATGCAAGTGGAAGTCAAAATAACTCAACACAATCTTCAATTCATCAATCATTTCCTGCTTATCCTCCCCCATTCCCACAAATTCACCAGAATCAAGATCACTACCAATCATTTCTTCAAATGTCCTCCACATTTTCAAGCCTTATTGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATATAGAAGCTTCTGCAGATTCTCCAGCATGCTTGCAAGGAGCCTTTCCATCTAGGCAAATTGGCTCTCCTCCAAATATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGACTTCTTCCTTTGTGTGCCCCTTTCCATTCTGCCTTTCCTTGTCCGTCCGCATCAGCTGCAGTAGTTCCATCAATGGACAATGGTGAAATACCGGCAGCCAAAACAGAGCAAGGTGGTGAAACTACTGTTCGGACTCCCCTGCAAAATCAGGATCCAGAATATGCAGATGCTCTTCAAGCTCAACATTCAGCTTCTAAGTCACCAGCAATTTCTTCATCAGAGCCAGAGGAAAGGGGAGATGCTAAGATGAATGCTTCATCAAAGCCTACTGATCATGAGAAGAGCAAAGCAAATTCTGAGCACCTTGACCCTAACAAACTGAAAGGCAGAAAACAGGTTGACCGTTCCTCATGTGGTTCTAATACCACCTCTAGCAGCGAGGTTGAGACAGACGCGCTAGAGAAGGATGAGAAAGGGAAAGAGGAAAACAAAGAACCTGATGCAAACCGATTAGCTATTGATTCCAGAAATCGTCGTGCTAGAAGTGCCAGCTGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGAAGGCTGGCCTTTCAGGCTCTCTTCTCAAGGGAGGTGTTGCCACAGAGCTTTTCTCCCCCACATGACTTGACAAATCCGGATCATCAGATGGGGAAAATTGAGGATAACAAGCATAATACGGATGATAAACTAGACAACAGCAAGAAACGCAGTTCTGACTGTAGAGGAGCGGAGAAAAATCTGTCATTCATTGAAAAACACAATGAGGAGGAGATACTGCTAACCATAGGGCTTGGACAAGGAAAGCTGAAGGCTAGTCGAACAGGGTTTAAACCTTACAAGAGATGTTCAATGGAAGTCAAGGAAAACAGGGTTGGAACTACTGGCAACCATGGTGAAGAGAAAGGTGCCAAGAAAATACGCTTGGAAGCGGAGGCTTCAACTTGA 2193 0.4492 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHDKFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIRQSIDIDIPPPRPKRKPNNPYPRKTSACAQTSHGGGKNGKLVPVSSSHCKPALDLEKEPHPEEAPCSLVTSADKNSMSVPLRSPCTLREFIPSAKELISRDETDESFVTTELKENQKLEIGAEGKRTEQSNGTGKASKLEDSDASHAKSVQSKKTDYLNCALTIEGMQGNHNYPRHVHVHVLDGKIGTGTQNPSQGMLFPESMFQPMGGVNGQPNIFANAAASNASGSQNNSTQSSIHQSFPAYPPPFPQIHQNQDHYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANIEASADSPACLQGAFPSRQIGSPPNMAAIAAATVAAATAWWAAHGLLPLCAPFHSAFPCPSASAAVVPSMDNGEIPAAKTEQGGETTVRTPLQNQDPEYADALQAQHSASKSPAISSSEPEERGDAKMNASSKPTDHEKSKANSEHLDPNKLKGRKQVDRSSCGSNTTSSSEVETDALEKDEKGKEENKEPDANRLAIDSRNRRARSASCLPDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNPDHQMGKIEDNKHNTDDKLDNSKKRSSDCRGAEKNLSFIEKHNEEEILLTIGLGQGKLKASRTGFKPYKRCSMEVKENRVGTTGNHGEEKGAKKIRLEAEAST 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0469 730 PANTHER SWI/SNF COMPLEX-RELATED 7 568 - -
Prci13g0469 730 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Prci13g0469 730 MobiDBLite consensus disorder prediction 482 497 - -
Prci13g0469 730 Gene3D - 26 73 - -
Prci13g0469 730 SMART sant 23 71 IPR001005 -
Prci13g0469 730 MobiDBLite consensus disorder prediction 554 582 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 617 659 - -
Prci13g0469 730 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Prci13g0469 730 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Prci13g0469 730 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Prci13g0469 730 MobiDBLite consensus disorder prediction 539 553 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 482 596 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 184 234 - -
Prci13g0469 730 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Prci13g0469 730 MobiDBLite consensus disorder prediction 498 538 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 629 659 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 184 207 - -
Prci13g0469 730 MobiDBLite consensus disorder prediction 87 128 - -
Prci13g0469 730 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Prci13g0469 730 CDD SANT 26 69 IPR001005 -
Prci13g0469 730 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Prci13g0469 730 MobiDBLite consensus disorder prediction 704 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0469 Prci-Chr13 3486513 3497529 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0469 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0469 K12133 - gmx:100271888 896.345