Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0462 ATGATGTCTTCTCATGATTCTATTAGCATGGCAATGAAATGCATATTTAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTGCTATCGACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGTTGCCAACAATCATTCTACTGGTTCTGTGGCTTCCACACAGAAAAACAATGAATGCTGTGAGAAAAAGAGTGAGGCCCAAAGCACTTGTACATCGCCTATTTTGGAAGCTGAGAGTGCATACATACAAAATATGCAGGATGCGTCCCAGCCCAGGAGTTATTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAGTCTTCAAAATTTGAAAGAGACTCCGCTAGGCATAATAATGGAACTACGAGGAAGTCGATTATTTATTCATCAGAGGCTGCTAGGTGCAACAGCATTACGAACTTGACAAATTTAAGGCTGGAGCCAGACAACTGTGCTGAAAAAGAGAATCAGGATGACTCTTTAAGAGCAGAGTTAAATAGAGAAAGTCCTAGTTTTGATACAGAGATTCATGGCTGCAAGAATGAATTGGTAGAACTTTCTAGGGGAACTATTGACTTGATTGCCACATTTGAGAACACTCCAAAGAATGCTGATGAGAACTATAGTCTTGCTGATGGTGGGAGAAACAAGTTTGATTTCGATCTGCAGTTGGAACTTTCCCTGCGAAATTTTTCTGGTAGTTCACGTAAACAAGAACCTGAGGAAAGGCAAACATTGCACCATTCAGATGCATCTGCCTTTTCTTGTTATAGTGGTAATAAGTTGCCACAGCCCCTTTTTCCAGCATTACCAACGAGTTCCGCCAAAGCCTATAGCACTGTGCTGAATTCCCAGAATTCTAATGAAACATCTGGATTCGATACTTCTTATCTGTATGGTGGGACAAATCATGCTCGGGAGAATACAATCCCACTGGCCCTTCACCAATCTGGACGAGTTGGAGTACAATCGCGAAATGTTCATCCTGGATCCTCTCCTGCTACTGGTGTTACTTCTGATGACATGTTCAGTGGACATGGCAATGTTATGCCTTCTATGTTCTGCACAGAATCCAGTGCTCATCCCATGTGGAGTCCCATGTCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCTGAAATTACATTCGTGTCAAATGCTGATAGTCACAACTCAGAACTACATTACCATTGGTCTGATGCCACCTGTGCTTCTCTCGATAAAAAGACAGAGCGCGATAGCAGCTACTTGGATCCCACGATGCACGAATATCCAGGTGCTTATCAGAATACCAGTATTGGTTCATGCCATCAAACTCCAAGCCAGATCAATGATGGTTCGTATGGAAGTCTGGGCAGTATAAGAGATGGAGATTATACTTCAGCTGTGGTAATGGAGAAAACCCCTGAAAGCTTTAGTAACAACGGTTATCACGATTATGAAGAATGCAGAGGGGCAGATTCCCAGCGTTCTAGCCTAAGGGAAGCTGCTCTAACAAAATTTCGACTGAAGAGGAAAGACAGATGCTATGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCAGAGAAGCGTCCTCGAATAAAAGGGCAATTTGTGCGTCAAGTTCCAAATGATTGTCCGCTTGTGGATTCTGGTGGTGGTCCCTGA 1695 0.4283 MMSSHDSISMAMKCIFKGAADFLIKPVRRNVLSTLWQHVWRRHPKKLEATSENNVANNHSTGSVASTQKNNECCEKKSEAQSTCTSPILEAESAYIQNMQDASQPRSYSNLSNIDTVKYEESSKFERDSARHNNGTTRKSIIYSSEAARCNSITNLTNLRLEPDNCAEKENQDDSLRAELNRESPSFDTEIHGCKNELVELSRGTIDLIATFENTPKNADENYSLADGGRNKFDFDLQLELSLRNFSGSSRKQEPEERQTLHHSDASAFSCYSGNKLPQPLFPALPTSSAKAYSTVLNSQNSNETSGFDTSYLYGGTNHARENTIPLALHQSGRVGVQSRNVHPGSSPATGVTSDDMFSGHGNVMPSMFCTESSAHPMWSPMSVSQKENSPFPEITFVSNADSHNSELHYHWSDATCASLDKKTERDSSYLDPTMHEYPGAYQNTSIGSCHQTPSQINDGSYGSLGSIRDGDYTSAVVMEKTPESFSNNGYHDYEECRGADSQRSSLREAALTKFRLKRKDRCYEKKVRYQSRKRLAEKRPRIKGQFVRQVPNDCPLVDSGGGP 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0462 564 ProSiteProfiles CCT domain profile. 508 550 IPR010402 GO:0005515
Prci13g0462 564 Pfam CCT motif 508 550 IPR010402 GO:0005515
Prci13g0462 564 SUPERFAMILY CheY-like 1 49 IPR011006 -
Prci13g0462 564 ProSiteProfiles Response regulatory domain profile. 1 40 IPR001789 GO:0000160
Prci13g0462 564 Gene3D - 1 180 - -
Prci13g0462 564 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 289 550 IPR045281 GO:0009909
Prci13g0462 564 MobiDBLite consensus disorder prediction 164 188 - -
Prci13g0462 564 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0462 Prci-Chr13 3415806 3420263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0462 503 551 Response Regulator Gene Family AT5G24470 85.714 4.22e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci13g0462 CCT 8e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0462 K12130 - gmx:100779346 562.377