Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0461 ATGGGTGAAGCGGTTCTGGCTAGCTGTGAAAAGGGGTTGGAGATGAGGTTGGGGCTGGAAGAGTTGAGCAAGATGAACCAGTTGAAGGATGATAGCTCCACAGAAATGGTTAAGTGGGACAACCTTCTTCCTCAGACGGTGCTCAGTGTTCTACTTGTGGAAGCTGATGATTCTACTCGCCAGATTATAGCAGCCCTTCTCCGTAAATGTAGTTACAGAGTTGTAGCGGTTTCTGATGGATTAAAGGCATGGGAAACATTGAAGAAGAAAGCTCCTGATGTTGATCTCATATTAACTGAAGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCACGAAATTTGTAGAAACATACCTATCATAATGATGTCTTCTCATGATTCTATTAGCATGGCAATGAAATGCATATTTAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTGCTATCGACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGTTGCCAACAATCATTCTACTGGTTCTGTGGCTTCCACACAGAAAAACAATGAATGCTGTGAGAAAAAGAGTGAGGCCCAAGATGCGTCCCAGCCCAGGAGTTATTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAGTCTTCAAAATTTGAAAGAGACTCCGCTAGGCATAATAATGGAACTACGAGGAAGTCGATTATTTATTCATCAGAGGCTGCTAGGTGCAACAGCATTACGAACTTGACAAATTTAAGGCTGGAGCCAGACAACTGTGCTGAAAAAGAGAATCAGGATGACTCTTTAAGAGCAGAGTTAAATAGAGAAAGTCCTAGTTTTGATACAGAGATTCATGGCTGCAAGAATGAATTGGTAGAACTTTCTAGGGGAACTATTGACTTGATTGCCACATTTGAGAACACTCCAAAGAATGCTGATGAGAACTATAGTCTTGCTGATGGTGGGAGAAACAAGTTTGATTTCGATCTGCAGTTGGAACTTTCCCTGCGAAATTTTTCTGGTAGTTCACGTAAACAAGAACCTGAGGAAAGGCAAACATTGCACCATTCAGATGCATCTGCCTTTTCTTGTTATAGTGGTAATAAGTTGCCACAGCCCCTTTTTCCAGCATTACCAACGAGTTCCGCCAAAGCCTATAGCACTGTGCTGAATTCCCAGAATTCTAATGAAACATCTGGATTCGATACTTCTTATCTGTATGGTGGGACAAATCATGCTCGGGAGAATACAATCCCACTGGCCCTTCACCAATCTGGACGAGTTGGAGTACAATCGCGAAATGTTCATCCTGGATCCTCTCCTGCTACTGGTGTTACTTCTGATGACATGTTCAGTGGACATGGCAATGTTATGCCTTCTATGTTCTGCACAGAATCCAGTGCTCATCCCATGTGGAGTCCCATGTCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCTGAAATTACATTCGTGTCAAATGCTGATAGTCACAACTCAGAACTACATTACCATTGGTCTGATGCCACCTGTGCTTCTCTCGATAAAAAGACAGAGCGCGATAGCAGCTACTTGGATCCCACGATGCACGAATATCCAGGTGCTTATCAGAATACCAGTATTGGTTCATGCCATCAAACTCCAAGCCAGATCAATGATGGTTCGTATGGAAGTCTGGGCAGTATAAGAGATGGAGATTATACTTCAGCTGTGGTAATGGAGAAAACCCCTGAAAGCTTTAGTAACAACGGTTATCACGATTATGAAGAATGCAGAGGGGCAGATTCCCAGCGTTCTAGCCTAAGGGAAGCTGCTCTAACAAAATTTCGACTGAAGAGGAAAGACAGATGCTATGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCAGAGAAGCGTCCTCGAATAAAAGGGCAATTTGTGCGTCAAGTTCCAAATGATTGTCCGCTTGTGGATTCTGGTGGTGGTCCCTGA 2019 0.4309 MGEAVLASCEKGLEMRLGLEELSKMNQLKDDSSTEMVKWDNLLPQTVLSVLLVEADDSTRQIIAALLRKCSYRVVAVSDGLKAWETLKKKAPDVDLILTEVELPSISGFALLTLIKEHEICRNIPIIMMSSHDSISMAMKCIFKGAADFLIKPVRRNVLSTLWQHVWRRHPKKLEATSENNVANNHSTGSVASTQKNNECCEKKSEAQDASQPRSYSNLSNIDTVKYEESSKFERDSARHNNGTTRKSIIYSSEAARCNSITNLTNLRLEPDNCAEKENQDDSLRAELNRESPSFDTEIHGCKNELVELSRGTIDLIATFENTPKNADENYSLADGGRNKFDFDLQLELSLRNFSGSSRKQEPEERQTLHHSDASAFSCYSGNKLPQPLFPALPTSSAKAYSTVLNSQNSNETSGFDTSYLYGGTNHARENTIPLALHQSGRVGVQSRNVHPGSSPATGVTSDDMFSGHGNVMPSMFCTESSAHPMWSPMSVSQKENSPFPEITFVSNADSHNSELHYHWSDATCASLDKKTERDSSYLDPTMHEYPGAYQNTSIGSCHQTPSQINDGSYGSLGSIRDGDYTSAVVMEKTPESFSNNGYHDYEECRGADSQRSSLREAALTKFRLKRKDRCYEKKVRYQSRKRLAEKRPRIKGQFVRQVPNDCPLVDSGGGP 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0461 672 ProSiteProfiles Response regulatory domain profile. 49 167 IPR001789 GO:0000160
Prci13g0461 672 MobiDBLite consensus disorder prediction 177 221 - -
Prci13g0461 672 SMART REC_2 48 163 IPR001789 GO:0000160
Prci13g0461 672 ProSiteProfiles CCT domain profile. 616 658 IPR010402 GO:0005515
Prci13g0461 672 Pfam Response regulator receiver domain 50 160 IPR001789 GO:0000160
Prci13g0461 672 SUPERFAMILY CheY-like 49 176 IPR011006 -
Prci13g0461 672 CDD psREC_PRR 50 153 - -
Prci13g0461 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 49 323 IPR045279 GO:0009736
Prci13g0461 672 MobiDBLite consensus disorder prediction 177 198 - -
Prci13g0461 672 Gene3D - 49 291 - -
Prci13g0461 672 Pfam CCT motif 616 658 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0461 Prci-Chr13 3415283 3420263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0461 611 659 Response Regulator Gene Family AT5G24470 85.714 7.73e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Prci13g0461 Response_reg 9.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0461 K12130 - gmx:100779346 651.358