Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0455 ATGTCGACTGGAGAGGTTGCTTGCACTTACGCGTCTTTGATTCTTCATGATGATAACATCCCAATCACTGCTGAGAAGATCTCAACCTTGGTGAAAGCAGCAAATGTTGATGTTGAATCTTATTGGCCAAGCTTATTTGCCAAGCTTGCCGAGAAGCGAGACATTGAGGATCTGATCCTCAATGCTGGTGGTGGTGGTGCTCCAGTTGTTGCTGCTGCTCCAGCTGCTGCAGCTGGTGCCGGAGCTGCTGCTGCTGCTGCTCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCCCAAGAAGAGAGTGATGACGACATGGGCTTCAGCTTATTTGATTAG 339 0.4926 MSTGEVACTYASLILHDDNIPITAEKISTLVKAANVDVESYWPSLFAKLAEKRDIEDLILNAGGGGAPVVAAAPAAAAGAGAAAAAAPAAEEKKKEEPQEESDDDMGFSLFD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0455 112 FunFam 60S acidic ribosomal protein P1 1 63 - -
Prci13g0455 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Prci13g0455 112 CDD Ribosomal_P1 5 61 - -
Prci13g0455 112 MobiDBLite consensus disorder prediction 86 112 - -
Prci13g0455 112 Pfam 60s Acidic ribosomal protein 22 111 - -
Prci13g0455 112 Gene3D - 1 63 IPR038716 -
Prci13g0455 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0455 Prci-Chr13 3367391 3368564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0455 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 57.759 2.88e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0455 K02942 - ncol:116261452 133.65