Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0450 ATGGGGAAGAAGGGAGGTACCTCCTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACACTGACAAAAGGAACCAGGAAGAAGACGAAGACAAGAAGAGAGAAAAACGACGATGGATTTTCAGAAAAGCAGCGAATCAGGAGGCAGCGGTGAGTATCCAGCAGACCCCAACCAAGCAGTACCCCGATTCGGCTGCTGCGACCACTGCTGATCGTGTGCCTGTGCCGACGGCGACGACATCGGTGACAGATCAGAACAATGCGCTTGCCGTGGCGGTGGCGAGGGCTGAAGCGGCCATGGTCACCGCCCAGGCGGCGGTGGAAGCGGCTAGACTGAGGGGGCCTTCGAATCAAGCTAGGGAGCACCATGCTGCTACGGCGATTCAAACAGCTTTCAGAGGATACCTTGCAAGGAGGGCACTTCGAGCGCTGAAGGGGTTGGTAAAATTGCAAGCTTTGGTGAGGGGTCATAATGTTCGGAAGCAGGCAAAAATGACCCTTCGGTGCATGCAGGCTCTGGTTCGAGTACAAGCCAGAGTGCTTGACCAGCGCTTGAGGTTCTCGCACGAGACCAGTAGTAGAAAATCCACATTCAGTGACACCAACAGCGTCTCGCGGTATCTTCTGGACATTTCAGATAGGAGATCGATGTCAAGAGAAGGAAGCAGTGTTGCAGATGACTGGGATGAACGCCCGCACACAGTTGAGGAACTTTCGAGGAGTGGTTGGAACTCGTCGATTGGGAATGAAGATGAGCTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCGACTGATCAAAGAGACACCATTAAAACTGTAGAAATTGACACTTCTCAGCCTTTCTCATTTCTGGGAGCCAACTACAGAAGATCACATCCAAATTATCAATATAACCCACACCAACCGCAAAGGCATTCAGTGGCTTCCCCACTCCACAGGAGCCACCAAAATAGTTCTCTTCATCAATCCCCTGCAACCCCATCTCCTGTAAAATCAAGGCCTATCCAAGTCCGGTCTGCTAGCCCTCGTGTTGGCAGGGAAGATAGAACCTACCATACGTCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATTCTGGAAGCCTGTACCAAAATGGAAGGGCTGGAACAAGCATCAGTGGTGGGGGTGCATTGCCTAATTACATGGCGGCAACTGAGTCTGCAAAGGCTCGAGTTCGGTCTCAAAGCGCGCCTAGGCAGAGGCCATCGACGCCGGAGAGGGACAGAGCAGGATCAGTAGCAAAGAAGAGGCTTTCATTCCTAAATGCTCCAGATCCTTGCGGTGTTGCAATGGGTTATGGAAATTATGGACATAACTTGAGAAGTCCAAGCTTCAAGAGTGTGAGTGCTTCACATTTTGGGCTGGAACAGCAGTCCAACTATTCTTCTTGCTACACTGAGAGTCTGGGTGGGGAGATTTCTCCATCTTCAACAGGTGATCTTAGAAGGTGGTTGAGATGA 1530 0.5124 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDEDKKREKRRWIFRKAANQEAAVSIQQTPTKQYPDSAAATTADRVPVPTATTSVTDQNNALAVAVARAEAAMVTAQAAVEAARLRGPSNQAREHHAATAIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRLRFSHETSSRKSTFSDTNSVSRYLLDISDRRSMSREGSSVADDWDERPHTVEELSRSGWNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDQRDTIKTVEIDTSQPFSFLGANYRRSHPNYQYNPHQPQRHSVASPLHRSHQNSSLHQSPATPSPVKSRPIQVRSASPRVGREDRTYHTSQTPSLRSNYHYSGSLYQNGRAGTSISGGGALPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSVAKKRLSFLNAPDPCGVAMGYGNYGHNLRSPSFKSVSASHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0450 509 MobiDBLite consensus disorder prediction 223 252 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 367 381 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 300 381 - -
Prci13g0450 509 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Prci13g0450 509 SMART iq_5 123 145 IPR000048 GO:0005515
Prci13g0450 509 SMART iq_5 146 167 IPR000048 GO:0005515
Prci13g0450 509 MobiDBLite consensus disorder prediction 223 240 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 410 438 - -
Prci13g0450 509 Pfam Protein of unknown function (DUF4005) 357 458 IPR025064 -
Prci13g0450 509 MobiDBLite consensus disorder prediction 300 351 - -
Prci13g0450 509 Coils Coil 96 116 - -
Prci13g0450 509 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Prci13g0450 509 PANTHER IQ-DOMAIN 5-RELATED 1 442 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 489 509 - -
Prci13g0450 509 FunFam IQ-domain 11 123 174 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 51 68 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 18 46 - -
Prci13g0450 509 MobiDBLite consensus disorder prediction 1 75 - -
Prci13g0450 509 Gene3D - 122 177 - -
Prci13g0450 509 Pfam IQ calmodulin-binding motif 125 145 IPR000048 GO:0005515
Prci13g0450 509 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0450 Prci-Chr13 3274283 3277177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0450 9 509 IQD Protein Family AT4G00820 54.628 1.39e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0450 - - adu:107472901 711.835