Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0449 ATGGGGAAGAAGGGAGGTACCTCCTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACACTGACAAAAGGAACCAGGAAGAAGACGAAGACAAGAAGAGAGAAAAACGACGATGGATTTTCAGAAAAGCAGCGAATCAGGAGGCAGCGGTGAGTATCCAGCAGACCCCAACCAAGCAGTACCCCGATTCGGCTGCTGCGACCACTGCTGATCGTGTGCCTGTGCCGACGGCGACGACATCGGTGACAGATCAGAACAATGCGCTTGCCGTGGCGGTGGCGAGGGCTGAAGCGGCCATGGTCACCGCCCAGGCGGCGGTGGAAGCGGCTAGACTGAGGGGGCCTTCGAATCAAGCTAGGGAGCACCATGCTGCTACGGCGATTCAAACAGCTTTCAGAGGATACCTTGCAAGGAGGGCACTTCGAGCGCTGAAGGGGTTGGTAAAATTGCAAGCTTTGGTGAGGGGTCATAATGTTCGGAAGCAGGCAAAAATGACCCTTCGGTGCATGCAGGCTCTGGTTCGAGTACAAGCCAGAGTGCTTGACCAGCGCTTGAGGTTCTCGCACGAGACCAGTAGTAGAAAATCCACATTCAGTGACACCAACAGCGTCTCGCGGTATCTTCTGGACATTTCAGATAGGAGATCGATGTCAAGAGAAGGAAGCAGTGTTGCAGATGACTGGGATGAACGCCCGCACACACTTTCGAGGAGTGGTTGGAACTCGTCGATTGGGAATGAAGATGAGCTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCGACTGATCAAAGAGACACCATTAAAACTGTAGAAATTGACACTTCTCAGCCTTTCTCATTTCTGGGAGCCAACTACAGAAGATCACATCCAAATTATCAATATAACCCACACCAACCGCAAAGGCATTCAGTGGCTTCCCCACTCCACAGGAGCCACCAAAATAGTTCTCTTCATCAATCCCCTGCAACCCCATCTCCTGTAAAATCAAGGCCTATCCAAGTCCGGTCTGCTAGCCCTCGTGTTGGCAGGGAAGATAGAACCTACCATACGTCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATTCTGGAAGCCTGTACCAAAATGGAAGGGCTGGAACAAGCATCAGTGGTGGGGGTGCATTGCCTAATTACATGGCGGCAACTGAGTCTGCAAAGGCTCGAGTTCGGTCTCAAAGCGCGCCTAGGCAGAGGCCATCGACGCCGGAGAGGGACAGAGCAGGATCAGTAGCAAAGAAGAGGCTTTCATTCCTAAATGCTCCAGATCCTTGCGGTGTTGCAATGGGTTATGGAAATTATGGACATAACTTGAGAAGTCCAAGCTTCAAGAGTGTGAGTGCTTCACATTTTGGGCTGGAACAGCAGTCCAACTATTCTTCTTGCTACACTGAGAGTCTGGGTGGGGAGATTTCTCCATCTTCAACAGGTGATCTTAGAAGGTGGTTGAGATGA 1521 0.5128 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDEDKKREKRRWIFRKAANQEAAVSIQQTPTKQYPDSAAATTADRVPVPTATTSVTDQNNALAVAVARAEAAMVTAQAAVEAARLRGPSNQAREHHAATAIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRLRFSHETSSRKSTFSDTNSVSRYLLDISDRRSMSREGSSVADDWDERPHTLSRSGWNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDQRDTIKTVEIDTSQPFSFLGANYRRSHPNYQYNPHQPQRHSVASPLHRSHQNSSLHQSPATPSPVKSRPIQVRSASPRVGREDRTYHTSQTPSLRSNYHYSGSLYQNGRAGTSISGGGALPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSVAKKRLSFLNAPDPCGVAMGYGNYGHNLRSPSFKSVSASHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0449 506 MobiDBLite consensus disorder prediction 486 506 - -
Prci13g0449 506 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Prci13g0449 506 SMART iq_5 123 145 IPR000048 GO:0005515
Prci13g0449 506 SMART iq_5 146 167 IPR000048 GO:0005515
Prci13g0449 506 Coils Coil 96 116 - -
Prci13g0449 506 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Prci13g0449 506 MobiDBLite consensus disorder prediction 297 378 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 364 378 - -
Prci13g0449 506 FunFam IQ-domain 11 123 174 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 51 68 - -
Prci13g0449 506 Gene3D - 122 177 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 18 46 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 297 348 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 1 75 - -
Prci13g0449 506 Pfam Protein of unknown function (DUF4005) 354 455 IPR025064 -
Prci13g0449 506 MobiDBLite consensus disorder prediction 408 436 - -
Prci13g0449 506 Pfam IQ calmodulin-binding motif 125 145 IPR000048 GO:0005515
Prci13g0449 506 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Prci13g0449 506 MobiDBLite consensus disorder prediction 223 249 - -
Prci13g0449 506 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Prci13g0449 506 MobiDBLite consensus disorder prediction 223 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0449 Prci-Chr13 3274283 3277177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0449 1 506 IQD Protein Family AT1G01110 54.804 1.47e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0449 - - adu:107472901 705.286