Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0436 ATGGGGCAGTGCTACGGCAAGACCAATCCCACCGCTGAAAATGACGGTGCCGCAAACACAACCACCATTATTGGCGATTTCGGTGGCCCTCCGCAGTCGCCTCTGCCGTCAGGAAGCGGTGGCAACGGGCTTCCATCGGTGAAGAACACGCCTGCCCGATCGTCCAACGCGAGCCCGTGGCCGAGCCCGTACCCGCAAGGCGTCAACGCAAGTCCGTTTCCGGGTGGGGTGTCGCCGTCGCCGGCGAGGACATCGACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCGCCGGCGAAGCATATCAGAGCGTCGCTGGCGAAGCGGCTTGGGCACGGGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGTGGGACAGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGTTAGGAAAGGAAGTGGGAAGGGGCCATTTTGGTCACACGTGCTCTGCAAGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGCGAAGATGACAACAGCAATAGCAATTGAAGATGTTCGAAGAGAGGTGAAGATGTTGAAAGCTCTATCCGGCCATAAGCATCTTGTCAAATATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGCAAGTATACTGAGGAAGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTTGCTTTTTGTCATCTCCAAGGTGTGGTGCACCGTGATCTAAAGCCTGAGAATTTTCTGTTCACTTCACGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCACCTGAGGTCCTTCACAGATCATATAGTCTGGAAGCAGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCTGATCCTAATTTTGATGACTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTTCTGAACAAGGATTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGCTGAGGGGGACAACCGTCCTATACCTTTAG 1257 0.502 MGQCYGKTNPTAENDGAANTTTIIGDFGGPPQSPLPSGSGGNGLPSVKNTPARSSNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGTEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGKYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRGTTVLYL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0436 418 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0436 418 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0436 418 MobiDBLite consensus disorder prediction 1 131 - -
Prci13g0436 418 FunFam Calcium-dependent protein kinase SK5 320 415 - -
Prci13g0436 418 Pfam Protein kinase domain 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0436 418 CDD STKc_CAMK 147 409 - -
Prci13g0436 418 Gene3D Phosphorylase Kinase; domain 1 141 237 - -
Prci13g0436 418 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Prci13g0436 418 Gene3D Transferase(Phosphotransferase) domain 1 238 415 - -
Prci13g0436 418 FunFam CDPK-related kinase 1 141 236 - -
Prci13g0436 418 MobiDBLite consensus disorder prediction 35 64 - -
Prci13g0436 418 MobiDBLite consensus disorder prediction 112 131 - -
Prci13g0436 418 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 411 - -
Prci13g0436 418 MobiDBLite consensus disorder prediction 1 27 - -
Prci13g0436 418 SUPERFAMILY Protein kinase-like (PK-like) 143 414 IPR011009 -
Prci13g0436 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Prci13g0436 418 FunFam CDPK-related kinase 3 140 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0436 Prci-Chr13 3070116 3074977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0436 1 414 EF-hand Containing Proteins AT3G50530 59.477 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci13g0436 Pkinase 7.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0436 K13412 - qsa:O6P43_027422 746.888