Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0435 ATGGGGCAGTGCTACGGCAAGACCAATCCCACCGCTGAAAATGACGGTGCCGCAAACACAACCACCATTATTGGCGATTTCGGTGGCCCTCCGCAGTCGCCTCTGCCGTGGAGCGGTGGCAACGGGCTTCCATCGGTGAAGAACACGCCTGCCCGATCGTCCAACGCGAGCCCGTGGCCGAGCCCGTACCCGCAAGGCGTCAACGCAAGTCCGTTTCCGGGTGGGGTGTCGCCGTCGCCGGCGAGGACATCGACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCGCCGGCGAAGCATATCAGAGCGTCGCTGGCGAAGCGGCTTGGGCACGGGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGTGGGACAGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGGTATAGTAATTTTGGAGCTAAGTATGAGTTAGGAAAGGAAGTGGGAAGGGGCCATTTTGGTCACACGTGCTCTGCAAGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGCGAAGATGACAACAGCAATAGCAATTGAAGATGTTCGAAGAGAGGTGAAGATGTTGAAAGCTCTATCCGGCCATAAGCATCTTGTCAAATATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGCAAGTATACTGAGGAAGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTTGCTTTTTGTCATCTCCAAGGTGTGGTGCACCGTGATCTAAAGCCTGAGAATTTTCTGTTCACTTCACGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCACCTGAGGTCCTTCACAGATCATATAGTCTGGAAGCAGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCTGATCCTAATTTTGATGACTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTTCTGAACAAGGATTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGCTGAGGGATGACAACCGTCCTATACCTTTAGATATATTAGTTTACAAATTGGTGAAGTGTTATCTTCTTGCAACACCATTCAAACGAGCAGCACTAAAGGCCCTTTCAAAAGCCTTGTCAGAAGATCAATTGGTATATCTGAGAGCACAATTCAGATTGTTAGAACCAAATAAAGACGGCTATGTCTCCCTTGACAACTTCAAAAATGTGATTTTGCAGGCTCTTGTACGTAATTCAACCAATGCCATGAGGGAGTCAAGGGTTCTAGATATTATACATACGATGGAGCCGCTTGCCTATCGGAAGATGGACTTCGGAGAATTCTGTGCAGCCGCAATCAGCACATACCAATTAGAGGCACTTGACACGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTTGAGAGAGAGGGCAACCGTGTGATATCGGTCGAAGAATTAGCAAGAGAGTTTAAGCTTGGTCCTTCGGCTTATTCAATTGTCAGGGATTGGATACGATATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTGACATTGCGCAGTTCAAACACGAGACATAATTAG 1809 0.4754 MGQCYGKTNPTAENDGAANTTTIIGDFGGPPQSPLPSXSGGNGLPSVKNTPARSSNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGTEPEQALDKSFGYSKXFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGKYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLVKCYLLATPFKRAALKALSKALSEDQLVYLRAQFRLLEPNKDGYVSLDNFKNVILQALVRNSTNAMRESRVLDIIHTMEPLAYRKMDFGEFCAAAISTYQLEALDTWEHIASTAFEHFEREGNRVISVEELAREFKLGPSAYSIVRDWIRYTDGKLSLLGYTKFLHGVTLRSSNTRHN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0435 604 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0435 604 SUPERFAMILY Protein kinase-like (PK-like) 147 429 IPR011009 -
Prci13g0435 604 FunFam CDPK-related kinase 3 140 312 - -
Prci13g0435 604 FunFam Calcium-dependent protein kinase SK5 320 415 - -
Prci13g0435 604 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0435 604 MobiDBLite consensus disorder prediction 1 131 - -
Prci13g0435 604 SUPERFAMILY EF-hand 436 592 IPR011992 -
Prci13g0435 604 CDD STKc_CAMK 147 409 - -
Prci13g0435 604 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Prci13g0435 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 573 - -
Prci13g0435 604 FunFam CDPK-related kinase 1 141 236 - -
Prci13g0435 604 Gene3D Transferase(Phosphotransferase) domain 1 238 420 - -
Prci13g0435 604 MobiDBLite consensus disorder prediction 35 64 - -
Prci13g0435 604 Gene3D Phosphorylase Kinase; domain 1 141 237 - -
Prci13g0435 604 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Prci13g0435 604 Pfam Protein kinase domain 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0435 604 Gene3D - 421 593 - -
Prci13g0435 604 MobiDBLite consensus disorder prediction 112 131 - -
Prci13g0435 604 MobiDBLite consensus disorder prediction 1 27 - -
Prci13g0435 604 FunFam CDPK-related kinase 1 446 522 - -
Prci13g0435 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0435 Prci-Chr13 3052932 3060647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0435 1 598 EF-hand Containing Proteins AT3G50530 57.585 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci13g0435 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0435 K13412 - qsa:O6P43_027422 1043.11