Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0412 ATGGTCCAGCGAACTTTAATACATTTCCAGATGAAAGCTTCAATCGAAGATAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGCTTGAGAGAATACAGCGTTAAACTCGAAAAGGGTTTGAATACCTTCGAGGTTGAGAAGCGGCGCGAGAGATATGGTTGGAACGAGTTAGCAAAAGAGAATGGGACGCCCTTGTGGCAACTAGTACTAGAGCAATTTGATGACATTCTTGTGAAGATTCTTCTGGTTGCAGCTTTTATATCATTCATTCTGGCTTATTTGCATGGAAGCGAATCAGGGGAGTCTGGGTTTGAAGCTTATGTGGAGCCACTCGTGATAATTTTGATTTTAGTACTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAACGCTGAGAAAGCACTTGAAGCTCTCAAAGAATTGCAGTGTGAATCTGGAAAAGTGTTAAGAGATGGGTATTTTGTGCCTGATTTGCCTGCACGAGAGCTTGTTCCTGGTGATATTGTGGAATTGCATGTAGGAGATAAAGTGCCTGCGGACATGAGAGTTGCTGCTCTGAAAACCTCAACATTGCGAGTTGAACAAAGCTCTCTAACTGGAGAAGCAATGCCTGTTTTGAAGGGCACAAATCCTATTTTCATGGATGATTGTGAGTTGCAGGCCAAGGAAAATATGGTTTTTGCAGGCACCACTGTTGTCAATGGGAGCTGTCTCTGTATTGTTGTCACCACTGGGATGAACACTGAAATTGGAAAGATACAGAAGCAAATTCATGATGCTTCTTTGGAGGACAGTGACACCCCCTTAAAGAAGAAGCTGGATGAGTTTGGTGGGCAGCTTACCACTGCAATTGGACTGGTTTGCCTTGTTGTCTGGGTTATAAACTACAAAAATTTCCTTTCCTGGGAGCTTGTGGGTGGATGGCCTTCAAACATCAAATTTTCTTTTGAGAAGTGCACCTATTACTTCAAAATTGCTGTTGCCCTGGCTGTAGCTGCAATCCCTGAAGGCCTTCCCACTGTCATCACCACTTGTTTAGCCCTGGGTACAAGAAAAATGGCACAAAAGAATGCAATTGTGCGAAAGCTTCCAAGTGTAGAAACTCTGGGATGCACGACTGTTATTTGTTCAGATAAAACTGGTACTCTGACAACAAATCAGATGTCTGTAAGAGAGTTCTTTACTTTGGGAGGAAAAACTACTGCTTCTCGAGTCATCTGTGTTGAAGGCTCAACTTATGATCCTAGGGATGGAGGAATTGTGGATTGGACTTGCTATAACATGGATGCGAACTTGCAGGCCATGGCAGAAATATGTGCCATTTGTAATGATGCTGGGATTCATTTTGATGGTCGCCTTTTCCGGGCTACAGGTTTGCCCACTGAAGCAGCTCTCAAGGTTTTGGTTGAAAAGATGGGAGTTCCAGATAACAAGGCAAGGAACAGAATTTGGGACACAGAAGTTGCTGCAAGCTACTTGAATAATAGCAACACTGTTAAGTTAGGAAGTTGTGATTGGTGGACAAGAAGATCCAAAAGAGTTGCCACATTAGAGTTTGATCGAATTAGGAAGTCAATGAGTGTTATTGTTCGTGAACCAACTGGACGAAATCGGCTTCTGGTTAAGGGAGCTGTTGAGAGTTTACTTGAACGTAGTTCACATGTGCAACTAGCTGATGGATCCCTGGTTCCAATTGATGAGCAATGTAGAGAACTACTGTTTTCAAGACTCCTAGAGATGAGTTCAAAAGGATTGCGTTGCTTGGGTTTGGCATATAAGGATGACTTGGGTGAATTTTCAGACTACTATACTGAAAATCATCCTGCTCACAAGAAATTGCTTGATCCTACTTGCTACTCATCCATCGAAAGTGATCTAGTATTTGTTGGTGTTGTTGGTCTAAGAGATCCTCCTCGTGGAGAAGTTCACAGGGCAATTGAGGATTGCAGAGAAGCTGGTATTAGAGTTATGGTAATAACTGGAGATAACAAGTCCACAGCAGAGGCTATTTGTCGGGAAATTAATCTGTTCTCCGGAGAAGAGGATCTTACCGAGAGAAGTATGACAGGCAAGGAGTTCAACTCTCTTTCTTCTTCAAAACAAGTTAAAATGTTGTCAAGACCTGGAGCCAAGGTTTTCTCTCGAGCTGAGCCTAGACACAAACAAGAGATCGTGAGGTTACTGAAGGAGATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCTCCTGCTCTTAAACTTGCTGACATAGGGATTGCCATGGGCATAACTGGAACTGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAACTTTAGTACCATTGTTTCAGCTGTTTCTGAGGGTCGCTCTATTTATGATAACATGAAAGCCTTCATTAGATACATGATATCATCCAATGTTGGAGAAGTGATATCTATATTCTTGACTGCTGCACTGGGGATCCCAGAATGTATGATACCTGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCTCCTGCAACAGCTTTGGGTTTTAACCCAGCTGATGTTGATATAATGCGAAAGCCACCTCGTAAAACTGATGAACCTCTCATCAGTTCATGGGTTCTTTTTCGTTATCTGGTAATTGGTTCCTATGTAGGAATTGCAACAGTGGGCATTTTTGTGTTGTGGTACACACAGGCATCTTTTCTCGGCATCAATCTGGCCAGTGATGGGCACACAATCATAGAACTGTCTCAGCTTCGCAACTGGGGAGAGTGTCATTCATGGTCAAATTTTACTGCTTCTCCATTTGAAGTAAGTGGTGGTCGCCTGATCACGTTCTCAAATCCATGTGATTACTTTTCAGTTGGTAAAGTGAAGGCTATGACTCTATCTCTCTCAGTCTTGGTGGCGATTGAGATGTTTAACTCTTTCAATGCTTTATCTGAAGAGAACAGCTTGTATGAAATGCCACCATGGAGGAACCCTTGGCTTTTGATAGCCACAACAATATCACTAGGACTCCATTGCCTGATCATCTATATTCCAATCCTTGCAGATGTGTTTGGTGTTGTTCCACTAAGTCTAAAAGAATGGTTTTTGGTCATCCTAGTTTCTTTACCTGTAATTTTTGTTGATGAGGTTCTGAAATTAGTGGTGAGGAGGAGGAGGACAGCAAGAAAGGAGAAAACAGCATGA 3195 0.4263 MVQRTLIHFQMKASIEDKPFPAWSWSVEQCLREYSVKLEKGLNTFEVEKRRERYGWNELAKENGTPLWQLVLEQFDDILVKILLVAAFISFILAYLHGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCLCIVVTTGMNTEIGKIQKQIHDASLEDSDTPLKKKLDEFGGQLTTAIGLVCLVVWVINYKNFLSWELVGGWPSNIKFSFEKCTYYFKIAVALAVAAIPEGLPTVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVREFFTLGGKTTASRVICVEGSTYDPRDGGIVDWTCYNMDANLQAMAEICAICNDAGIHFDGRLFRATGLPTEAALKVLVEKMGVPDNKARNRIWDTEVAASYLNNSNTVKLGSCDWWTRRSKRVATLEFDRIRKSMSVIVREPTGRNRLLVKGAVESLLERSSHVQLADGSLVPIDEQCRELLFSRLLEMSSKGLRCLGLAYKDDLGEFSDYYTENHPAHKKLLDPTCYSSIESDLVFVGVVGLRDPPRGEVHRAIEDCREAGIRVMVITGDNKSTAEAICREINLFSGEEDLTERSMTGKEFNSLSSSKQVKMLSRPGAKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVSEGRSIYDNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRKTDEPLISSWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLASDGHTIIELSQLRNWGECHSWSNFTASPFEVSGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSFNALSEENSLYEMPPWRNPWLLIATTISLGLHCLIIYIPILADVFGVVPLSLKEWFLVILVSLPVIFVDEVLKLVVRRRRTARKEKTA 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0412 1064 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 388 639 - -
Prci13g0412 1064 SUPERFAMILY Calcium ATPase, transduction domain A 150 258 IPR008250 -
Prci13g0412 1064 NCBIfam HAD-IC family P-type ATPase 713 825 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g0412 1064 NCBIfam HAD-IC family P-type ATPase 316 403 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g0412 1064 Pfam Cation transporting ATPase, C-terminus 825 1051 IPR006068 -
Prci13g0412 1064 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 1056 IPR023298 -
Prci13g0412 1064 Gene3D - 73 1053 - -
Prci13g0412 1064 PANTHER CALCIUM-TRANSPORTING ATPASE 29 1059 - -
Prci13g0412 1064 Pfam E1-E2 ATPase 144 358 - -
Prci13g0412 1064 Pfam Cation transporter/ATPase, N-terminus 23 90 IPR004014 -
Prci13g0412 1064 FunFam Calcium-transporting ATPase, putative 125 260 - -
Prci13g0412 1064 Pfam haloacid dehalogenase-like hydrolase 375 754 - -
Prci13g0412 1064 Gene3D - 388 639 IPR023299 GO:0000166
Prci13g0412 1064 SMART Cation_ATPase_N_a_2 21 95 IPR004014 -
Prci13g0412 1064 FunFam Calcium-transporting ATPase, putative 229 374 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 196 210 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 654 664 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 740 759 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 632 643 - -
Prci13g0412 1064 PRINTS P-type cation-transporting ATPase superfamily signature 764 776 - -
Prci13g0412 1064 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Prci13g0412 1064 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 636 IPR023299 GO:0000166
Prci13g0412 1064 SUPERFAMILY HAD-like 376 844 IPR036412 -
Prci13g0412 1064 Gene3D - 40 262 - -
Prci13g0412 1064 SFLD p-type atpase 359 792 IPR044492 -
Prci13g0412 1064 PRINTS Sodium/potassium-transporting ATPase signature 371 392 - -
Prci13g0412 1064 PRINTS Sodium/potassium-transporting ATPase signature 993 1017 - -
Prci13g0412 1064 SFLD C1.7: P-type atpase like 359 792 - -
Prci13g0412 1064 FunFam Calcium-transporting P-type ATPase, putative 634 785 - -
Prci13g0412 1064 Gene3D - 375 785 IPR023214 -
Prci13g0412 1064 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 804 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0412 Prci-Chr13 2837600 2842847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0412 16 1062 Primary Pumps ATPases(2) AT4G00900 77.545 0.0 1683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0412 K01537 - gmx:100792952 1835.46