Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0406 ATGAAGTTCTATCATTCTTGGGTTGATGATAAGAACAAAACTGTTAACATGATTACTGAGCTCTTCACGTCTGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTTGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATTCACAGTCACAAGCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCACGGAGAAATTAAGATAGGAGACCTAGGCTTGGCAACAGTGATGCAACAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTTGAGATGGTTACTTTTGAGTATCCTTATAGCGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCTGCTTCTCTTAATAGGGTGAATGACCCCCAAATTAGAGAGTTTATTGAAAAATGTTTGGTTCCGGCATCTCATAGATTGTCTGCAGAAGAGCTTCTCAATGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGCCCGAGATCCTTTACAGTTGCCTCATCAAACTCCAAGATCTATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGACATAGATCCTGACTATAAACAGATTTCTGTGAGTACCTATGCTGAAAGCAACTGTGGAAGTCCCCAATCTCCAGTTCTAGAACTCCAGAGGACATCTAAGGAGAATGAATTTAAGTTGAAAGGGACAAAAAATGATGATAAATCTGCATCATTGACCTTGCGTATTGCAAATTCCTCTGGTCGAGTTAAGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGCTAGCAGAACATGATGTGACCTTAATTGCTGAGCTTATTGATCATTTGATAACAAAGCTTCTACCTGGCTGGAAACCTTCATCTGATTACTCCTCAAGTGAAGGAATAAGCCTCGATGATGGGTCTTCAACACTGGTAGATGGCCAAACCAAAACAAGTCTATGGGATTCCATCCTAGCTAGTGATCCTGCTGGATTAGTTATTTACCAAGATGATGTGTTAGGGCTGAATATTGATGATCAAAAAGGTGAGGTTACACCTGAGGAGGGCTTTTTACTAGTCGACACTGTTAATAATGCTACTTTGCATGGGGAGTGTAATTCTTCTCCCACTTTGGCTGACTTGGAATATCAATATTCACAAGGATCCACAACCTCGGTGCTACTTGCTAAAGATTTGTCTATAAAAATAGACAACTTTCTCGATTTAAATGGGAGCTCTAAATCCTTGAATTGGTCTATCTCTGAACTAGACCTTAGGGATACATATCTTGAGGCTCGCAAATTGCAGAGAACAACAGATAGTAGTGTCCGGGAAGGCATTGTGATAAACAACTTTACAAAGAATGAAACGATCCCACCATTTGATGGCACATGTCATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTGGCAGAGGAGAACGCAGAGTCTGAGCTAAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCATGAACAATTTCAAGAACTTTCTAGAAGGAAGTTGGCGCATTTGGATCACATCAAAAAGAGATGGATGGCTAAGAAGAAATTGGCTGTTCATTGA 1749 0.4002 MKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARQILQGLAYIHSHKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIFEMVTFEYPYSECKNPAQIYKKVTSGIKPASLNRVNDPQIREFIEKCLVPASHRLSAEELLNDPFLQVENPKNPARDPLQLPHQTPRSIDLSRSGPLSMDIDPDYKQISVSTYAESNCGSPQSPVLELQRTSKENEFKLKGTKNDDKSASLTLRIANSSGRVKNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTLIAELIDHLITKLLPGWKPSSDYSSSEGISLDDGSSTLVDGQTKTSLWDSILASDPAGLVIYQDDVLGLNIDDQKGEVTPEEGFLLVDTVNNATLHGECNSSPTLADLEYQYSQGSTTSVLLAKDLSIKIDNFLDLNGSSKSLNWSISELDLRDTYLEARKLQRTTDSSVREGIVINNFTKNETIPPFDGTCHAFSLTSSCSSLSLAEENAESELKLEIDAIEAFYHEQFQELSRRKLAHLDHIKKRWMAKKKLAVH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0406 582 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0406 582 Pfam Protein kinase domain 3 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0406 582 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0406 582 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 352 - -
Prci13g0406 582 Gene3D - 277 352 - -
Prci13g0406 582 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 281 335 IPR024678 GO:0004674|GO:0005524
Prci13g0406 582 FunFam probable serine/threonine-protein kinase WNK9 22 201 - -
Prci13g0406 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Prci13g0406 582 Gene3D Transferase(Phosphotransferase) domain 1 22 201 - -
Prci13g0406 582 SUPERFAMILY Protein kinase-like (PK-like) 2 197 IPR011009 -
Prci13g0406 582 MobiDBLite consensus disorder prediction 201 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0406 Prci-Chr13 2802656 2807320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0406 1 339 MAP Kinase Kinase Kinase AT5G41990 60.571 7.59e-136 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci13g0406 Pkinase 4.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0406 K08867 - qsa:O6P43_027404 725.317