Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0405 ATGGATTATGGGGTTGAATTAGCATTGCCAGAAAATGATGGAACAGGTACAAAGGATCCTTCTAAATTCGAGGAGGATTTTGCTGAGAAAGATCCAACTGGCCGATATATCCGGTACAATGAAGTCTTAGGCAAGGGTGCTTTCAAGACTGTTTATAGGGCCTTTGATGAAGTTGATGGAATCGAAGTTGCTTGGAACCAAGTAAGGATTGATGATGTTCTACAATCAGCAGTTGATCTAGCAAAACTATACTCTGAAGTTCACATATTGAAGTCTTTGAAACATGAAAATATTATGAAGTTCTATCATTCTTGGGTTGATGATAAGAACAAAACTGTTAACATGATTACTGAGCTCTTCACGTCTGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTTGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATTCACAGTCACAAGCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCACGGAGAAATTAAGATAGGAGACCTAGGCTTGGCAACAGTGATGCAACAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTTGAGATGGTTACTTTTGAGTATCCTTATAGCGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCTGCTTCTCTTAATAGGGTGAATGACCCCCAAATTAGAGAGTTTATTGAAAAATGTTTGGTTCCGGCATCTCATAGATTGTCTGCAGAAGAGCTTCTCAATGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGCCCGAGATCCTTTACAGTTGCCTCATCAAACTCCAAGATCTATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGACATAGATCCTGACTATAAACAGATTTCTGTGAGTACCTATGCTGAAAGCAACTGTGGAAGTCCCCAATCTCCAGTTCTAGAACTCCAGAGGACATCTAAGGAGAATGAATTTAAGTTGAAAGGGACAAAAAATGATGATAAATCTGCATCATTGACCTTGCGTATTGCAAATTCCTCTGGTCGAGTTAAGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGCTAGCAGAACATGATGTGACCTTAATTGCTGAGCTTATTGATCATTTGATAACAAAGCTTCTACCTGGCTGGAAACCTTCATCTGATTACTCCTCAAGTGAAGGAATAAGCCTCGATGATGGGTCTTCAACACTGGTAGATGGCCAAACCAAAACAAGTCTATGGGATTCCATCCTAGCTAGTGATCCTGCTGGATTAGTTATTTACCAAGATGATGTGTTAGGGCTGAATATTGATGATCAAAAAGGTGAGGTTACACCTGAGGAGGGCTTTTTACTAGTCGACACTGTTAATAATGCTACTTTGCATGGGGAGTGTAATTCTTCTCCCACTTTGGCTGACTTGGAATATCAATATTCACAAGGATCCACAACCTCGGTGCTACTTGCTAAAGATTTGTCTATAAAAATAGACAACTTTCTCGATTTAAATGGGAGCTCTAAATCCTTGAATTGGTCTATCTCTGAACTAGACCTTAGGGATACATATCTTGAGGCTCGCAAATTGCAGAGAACAACAGATAGTAGTGTCCGGGAAGGCATTGTGATAAACAACTTTACAAAGAATGAAACGATCCCACCATTTGATGGCACATGTCATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTGGCAGAGGAGAACGCAGAGTCTGAGCTAAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCATGAACAATTTCAAGAACTTTCTAGAAGGAAGTTGGCGCATTTGGATCACATCAAAAAGAGATGGATGGCTAAGAAGAAATTGGCTGTTCATTGA 2043 0.3979 MDYGVELALPENDGTGTKDPSKFEEDFAEKDPTGRYIRYNEVLGKGAFKTVYRAFDEVDGIEVAWNQVRIDDVLQSAVDLAKLYSEVHILKSLKHENIMKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARQILQGLAYIHSHKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIFEMVTFEYPYSECKNPAQIYKKVTSGIKPASLNRVNDPQIREFIEKCLVPASHRLSAEELLNDPFLQVENPKNPARDPLQLPHQTPRSIDLSRSGPLSMDIDPDYKQISVSTYAESNCGSPQSPVLELQRTSKENEFKLKGTKNDDKSASLTLRIANSSGRVKNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTLIAELIDHLITKLLPGWKPSSDYSSSEGISLDDGSSTLVDGQTKTSLWDSILASDPAGLVIYQDDVLGLNIDDQKGEVTPEEGFLLVDTVNNATLHGECNSSPTLADLEYQYSQGSTTSVLLAKDLSIKIDNFLDLNGSSKSLNWSISELDLRDTYLEARKLQRTTDSSVREGIVINNFTKNETIPPFDGTCHAFSLTSSCSSLSLAEENAESELKLEIDAIEAFYHEQFQELSRRKLAHLDHIKKRWMAKKKLAVH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0405 680 SUPERFAMILY Protein kinase-like (PK-like) 30 295 IPR011009 -
Prci13g0405 680 Gene3D - 375 450 - -
Prci13g0405 680 Gene3D Phosphorylase Kinase; domain 1 21 118 - -
Prci13g0405 680 Gene3D Transferase(Phosphotransferase) domain 1 120 299 - -
Prci13g0405 680 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0405 680 FunFam probable serine/threonine-protein kinase WNK9 120 299 - -
Prci13g0405 680 CDD STKc_WNK 35 294 - -
Prci13g0405 680 MobiDBLite consensus disorder prediction 299 324 - -
Prci13g0405 680 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 455 - -
Prci13g0405 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Prci13g0405 680 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0405 680 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0405 680 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 433 IPR024678 GO:0004674|GO:0005524
Prci13g0405 680 FunFam Probable serine/threonine-protein kinase WNK1 22 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0405 Prci-Chr13 2802654 2807320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0405 24 437 MAP Kinase Kinase Kinase AT5G41990 63.294 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci13g0405 Pkinase 6.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0405 K08867 - qsa:O6P43_027404 868.996