Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0402 ATGGATTATGGGGTTGAATTAGCATTGCCAGAAAATGATGGAACAGGTACAAAGGATCCTTCTAAATTCGAGGAGGATTTTGCTGAGAAAGATCCAACTGGCCGATATATCCGGTACAATGAAGTCTTAGGCAAGGGTGCTTTCAAGACTGTGGCCTTTGATGAAGTTGATGGAATCGAAGTTGCTTGGAACCAAGTAAGGATTGATGATGTTCTACAATCAGCAGTTGATCTAGCAAAACTATACTCTGAAGTTCACATATTGAAGTCTTTGAAACATGAAAATATTATGAAGTTCTATCATTCTTGGGTTGATGATAAGAACAAAACTGTTAACATGATTACTGAGCTCTTCACGTCTGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTTGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATTCACAGTCACAAGCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCACGGAGAAATTAAGATAGGAGACCTAGGCTTGGCAACAGTGATGCAACAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTTGAGATGGTTACTTTTGAGTATCCTTATAGCGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCTGCTTCTCTTAATAGGGTGAATGACCCCCAAATTAGAGAGTTTATTGAAAAATGTTTGGTTCCGGCATCTCATAGATTGTCTGCAGAAGAGCTTCTCAATGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGCCCGAGATCCTTTACAGTTGCCTCATCAAACTCCAAGATCTATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGACATAGATCCTGACTATAAACAGATTTCTGTGAGTACCTATGCTGAAAGCAACTGTGGAAGTCCCCAATCTCCAGTTCTAGAACTCCAGAGGACATCTAAGGAGAATGAATTTAAGTTGAAAGGGACAAAAAATGATGATAAATCTGCATCATTGACCTTGCGTATTGCAAATTCCTCTGGTCGAGTTAAGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGCTAGCAGAACATGATGTGACCTTAATTGCTGAGCTTATTGATCATTTGATAACAAAGCTTCTACCTGGCTGGAAACCTTCATCTGATTACTCCTCAAGTGAAGGAATAAGCCTCGATGATGGGTCTTCAACACTGGTAGATGGCCAAACCAAAACAAGTCTATGGGATTCCATCCTAGCTAGTGATCCTGCTGGATTAGTTATTTACCAAGATGATGTGTTAGGGCTGAATATTGATGATCAAAAAGGTGAGGTTACACCTGAGGAGGGCTTTTTACTAGTCGACACTGTTAATAATGCTACTTTGCATGGGGAGTGTAATTCTTCTCCCACTTTGGCTGACTTGGAATATCAATATTCACAAGGATCCACAACCTCGGTGCTACTTGCTAAAGATTTGTCTATAAAAATAGACAACTTTCTCGATTTAAATGGGAGCTCTAAATCCTTGAATTGGTCTATCTCTGAACTAGACCTTAGGGATACATATCTTGAGGCTCGCAAATTGCAGAGAACAACAGATAGTAGTGTCCGGGAAGGCATTGTGATAAACAACTTTACAAAGAATGAAACGATCCCACCATTTGATGGCACATGTCATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTGGCAGAGGAGAACGCAGAGTCTGAGCTAAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCATGAACAATTTCAAGAACTTTCTAGAAGGAAGTTGGCGCATTTGGATCACATCAAAAAGAGATGGATGGCTAAGAAGAAATTGGCTGTTCATTGA 2037 0.3986 MDYGVELALPENDGTGTKDPSKFEEDFAEKDPTGRYIRYNEVLGKGAFKTVAFDEVDGIEVAWNQVRIDDVLQSAVDLAKLYSEVHILKSLKHENIMKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARQILQGLAYIHSHKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIFEMVTFEYPYSECKNPAQIYKKVTSGIKPASLNRVNDPQIREFIEKCLVPASHRLSAEELLNDPFLQVENPKNPARDPLQLPHQTPRSIDLSRSGPLSMDIDPDYKQISVSTYAESNCGSPQSPVLELQRTSKENEFKLKGTKNDDKSASLTLRIANSSGRVKNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTLIAELIDHLITKLLPGWKPSSDYSSSEGISLDDGSSTLVDGQTKTSLWDSILASDPAGLVIYQDDVLGLNIDDQKGEVTPEEGFLLVDTVNNATLHGECNSSPTLADLEYQYSQGSTTSVLLAKDLSIKIDNFLDLNGSSKSLNWSISELDLRDTYLEARKLQRTTDSSVREGIVINNFTKNETIPPFDGTCHAFSLTSSCSSLSLAEENAESELKLEIDAIEAFYHEQFQELSRRKLAHLDHIKKRWMAKKKLAVH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0402 678 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0402 678 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 431 IPR024678 GO:0004674|GO:0005524
Prci13g0402 678 Gene3D Phosphorylase Kinase; domain 1 21 116 - -
Prci13g0402 678 Pfam Protein kinase domain 40 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0402 678 CDD STKc_WNK 35 292 - -
Prci13g0402 678 SUPERFAMILY Protein kinase-like (PK-like) 30 293 IPR011009 -
Prci13g0402 678 Gene3D Transferase(Phosphotransferase) domain 1 118 297 - -
Prci13g0402 678 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0402 678 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 453 - -
Prci13g0402 678 FunFam probable serine/threonine-protein kinase WNK9 118 297 - -
Prci13g0402 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Prci13g0402 678 MobiDBLite consensus disorder prediction 297 322 - -
Prci13g0402 678 Gene3D - 373 448 - -
Prci13g0402 678 FunFam Probable serine/threonine-protein kinase WNK1 22 116 - -
Prci13g0402 678 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0402 Prci-Chr13 2802653 2807320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0402 24 435 MAP Kinase Kinase Kinase AT5G41990 63.059 8.70e-179 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci13g0402 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0402 K08867 - qsa:O6P43_027404 860.522