Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0401 ATGGATTATGGGGTTGAATTAGCATTGCCAGAAAATGATGGAACAGGTACAAAGGATCCTTCTAAATTCGAGGAGGATTTTGCTGAGAAAGATCCAACTGGCCGATATATCCGGTACAATGAAGTCTTAGGCAAGGGTGCTTTCAAGACTGTGTATGATACTGATATCTTATCTCTTATTATTGTTGAATTATTGTTGTTACTTTATGTTACCTCTAATCTTTCTCTCATTGGTAGTTATAGGGCCTTTGATGAAGTTGATGGAATCGAAGTTGCTTGGAACCAAGTAAGGATTGATGATGTTCTACAATCAGCAGTTGATCTAGCAAAACTATACTCTGAAGTTCACATATTGAAGTCTTTGAAACATGAAAATATTATGAAGTTCTATCATTCTTGGGTTGATGATAAGAACAAAACTGTTAACATGATTACTGAGCTCTTCACGTCTGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTTGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATTCACAGTCACAAGCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCACGGAGAAATTAAGATAGGAGACCTAGGCTTGGCAACAGTGATGCAACAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTTGAGATGGTTACTTTTGAGTATCCTTATAGCGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCTGCTTCTCTTAATAGGGTGAATGACCCCCAAATTAGAGAGTTTATTGAAAAATGTTTGGTTCCGGCATCTCATAGATTGTCTGCAGAAGAGCTTCTCAATGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGCCCGAGATCCTTTACAGTTGCCTCATCAAACTCCAAGATCTATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGACATAGATCCTGACTATAAACAGATTTCTGTGAGTACCTATGCTGAAAGCAACTGTGGAAGTCCCCAATCTCCAGTTCTAGAACTCCAGAGGACATCTAAGGAGAATGAATTTAAGTTGAAAGGGACAAAAAATGATGATAAATCTGCATCATTGACCTTGCGTATTGCAAATTCCTCTGGTCGAGTTAAGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGCTAGCAGAACATGATGTGACCTTAATTGCTGAGCTTATTGATCATTTGATAACAAAGCTTCTACCTGGCTGGAAACCTTCATCTGATTACTCCTCAAGTGAAGGAATAAGCCTCGATGATGGGTCTTCAACACTGGTAGATGGCCAAACCAAAACAAGTCTATGGGATTCCATCCTAGCTAGTGATCCTGCTGGATTAGTTATTTACCAAGATGATGTGTTAGGGCTGAATATTGATGATCAAAAAGGTGAGGTTACACCTGAGGAGGGCTTTTTACTAGTCGACACTGTTAATAATGCTACTTTGCATGGGGAGTGTAATTCTTCTCCCACTTTGGCTGACTTGGAATATCAATATTCACAAGGATCCACAACCTCGGTGCTACTTGCTAAAGATTTGTCTATAAAAATAGACAACTTTCTCGATTTAAATGGGAGCTCTAAATCCTTGAATTGGTCTATCTCTGAACTAGACCTTAGGGATACATATCTTGAGGCTCGCAAATTGCAGAGAACAACAGATAGTAGTGTCCGGGAAGGCATTGTGATAAACAACTTTACAAAGAATGAAACGATCCCACCATTTGATGGCACATGTCATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTGGCAGAGGAGAACGCAGAGTCTGAGCTAAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCATGAACAATTTCAAGAACTTTCTAGAAGGAAGTTGGCGCATTTGGATCACATCAAAAAGAGATGGATGGCTAAGAAGAAATTGGCTGTTCATTGA 2127 0.393 MDYGVELALPENDGTGTKDPSKFEEDFAEKDPTGRYIRYNEVLGKGAFKTVYDTDILSLIIVELLLLLYVTSNLSLIGSYRAFDEVDGIEVAWNQVRIDDVLQSAVDLAKLYSEVHILKSLKHENIMKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARQILQGLAYIHSHKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIFEMVTFEYPYSECKNPAQIYKKVTSGIKPASLNRVNDPQIREFIEKCLVPASHRLSAEELLNDPFLQVENPKNPARDPLQLPHQTPRSIDLSRSGPLSMDIDPDYKQISVSTYAESNCGSPQSPVLELQRTSKENEFKLKGTKNDDKSASLTLRIANSSGRVKNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTLIAELIDHLITKLLPGWKPSSDYSSSEGISLDDGSSTLVDGQTKTSLWDSILASDPAGLVIYQDDVLGLNIDDQKGEVTPEEGFLLVDTVNNATLHGECNSSPTLADLEYQYSQGSTTSVLLAKDLSIKIDNFLDLNGSSKSLNWSISELDLRDTYLEARKLQRTTDSSVREGIVINNFTKNETIPPFDGTCHAFSLTSSCSSLSLAEENAESELKLEIDAIEAFYHEQFQELSRRKLAHLDHIKKRWMAKKKLAVH 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0401 708 ProSiteProfiles Protein kinase domain profile. 37 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0401 708 Gene3D - 404 478 - -
Prci13g0401 708 SMART serkin_6 71 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0401 708 Gene3D Transferase(Phosphotransferase) domain 1 148 327 - -
Prci13g0401 708 CDD STKc_WNK 35 322 - -
Prci13g0401 708 SUPERFAMILY Protein kinase-like (PK-like) 43 363 IPR011009 -
Prci13g0401 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Prci13g0401 708 MobiDBLite consensus disorder prediction 327 352 - -
Prci13g0401 708 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 483 - -
Prci13g0401 708 FunFam Probable serine/threonine-protein kinase WNK1 73 146 - -
Prci13g0401 708 FunFam probable serine/threonine-protein kinase WNK9 148 327 - -
Prci13g0401 708 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 407 461 IPR024678 GO:0004674|GO:0005524
Prci13g0401 708 Gene3D Phosphorylase Kinase; domain 1 21 146 - -
Prci13g0401 708 Pfam Protein kinase domain 81 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0401 Prci-Chr13 2802653 2807320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0401 24 465 MAP Kinase Kinase Kinase AT5G41990 59.382 5.83e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci13g0401 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0401 K08867 - qsa:O6P43_027404 853.973