Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0394 ATGGAAGGGAATATAGAAGCAAACAAAAATAATCCATGCACAAAAGCGGTAGGGTTGGAGAAGAAGACAAGGCCACAAGAACAGCTGAATTGTCCTCGATGCAATTCTACAAACACCAAGTTCTGCTACTACAACAACTATAGTCTCACACAACCCAGATATTTCTGCAAGACTTGCAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGCGGTTCCAGAAAGAACAAGAAGCTCATCACCAATCCTTCATCTTCACCACCACCACAACCATCATCAAGGGTTCTTCCTGACTTGAACCCACCAACAACGACTTCTGCTTCTTCTTCTTCTTCTCAAAATCCTAAAATATTAATGCAAGGAGGCCAAGATCTCAATCTGGCTTTCCCACCTATTGTGGAGAATTACGATCATCATCATCATCATGGGCTTAGTTACCAAAGCTCTTCTTCTTCTTCAAGTTCTTCTTCTGCTTTGGAACTGCTCAGGGCAGGCATGGCTTCGAGGGGTTTGAATAATAATAACCCTTTTGTTCATCATAATATAATACTGATGCCAACCTCAAACAATGCGCTTTTCCCTTCACCTGGGTTTAATCCCATGCATGAGGCTAAGCCAAGCCTTGGATATTCAGTGGATGATCAAGGGCTTCGAAGCAGATATGGTGTTCAAGATAATAATGTTAATGCTGGTGGAGGAAGGTTTTTGTTTCCTTTTGGAGATGTCAAGCCCATTCCAGGAGCTCGTGAAGTGGAAGAGAATAAAGAACATGCTGGGAATTCGTCTTCTGGGTATTGGACAGGGATGATTGGTGAAGGATCCTGGTAA 843 0.4353 MEGNIEANKNNPCTKAVGLEKKTRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLITNPSSSPPPQPSSRVLPDLNPPTTTSASSSSSQNPKILMQGGQDLNLAFPPIVENYDHHHHHGLSYQSSSSSSSSSSALELLRAGMASRGLNNNNPFVHHNIILMPTSNNALFPSPGFNPMHEAKPSLGYSVDDQGLRSRYGVQDNNVNAGGGRFLFPFGDVKPIPGAREVEENKEHAGNSSSGYWTGMIGEGSW 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0394 280 MobiDBLite consensus disorder prediction 257 280 - -
Prci13g0394 280 MobiDBLite consensus disorder prediction 71 123 - -
Prci13g0394 280 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Prci13g0394 280 MobiDBLite consensus disorder prediction 102 123 - -
Prci13g0394 280 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Prci13g0394 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 172 IPR045174 GO:0003700|GO:0006355
Prci13g0394 280 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0394 Prci-Chr13 2771197 2773277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0394 16 280 C2C2-Dof Transcription Factor Family AT3G61850 46.918 6.04e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci13g0394 zf-Dof 2.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0394 - - gmx:778110 275.018