Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0324 ATGGACAAACAACGTACAAGGCAACGCAAGACTACTAATACCTCTGACTCTGAAGAGGTGAGCAGTGTGGAGTGGGAGTTCATAAACATGTCGGAGGAAGAAGAAAATCTCATCCACAGAATGTACAGCCTCGTTGGAGACAGCAGATGGAGTCTGATAGCAGGTAGGATTCCAGGTCGGAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAAGTGTTCGCTACCAGAAGAGAAAAACTTAATTAG 258 0.4457 MDKQRTRQRKTTNTSDSEEVSSVEWEFINMSEEEENLIHRMYSLVGDSRWSLIAGRIPGRKAEEIERFWIMRHSQVFATRREKLN 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0324 85 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g0324 85 Gene3D - 31 74 - -
Prci13g0324 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 29 73 - -
Prci13g0324 85 Pfam Myb-like DNA-binding domain 30 70 IPR001005 -
Prci13g0324 85 ProSiteProfiles Myb-like domain profile. 31 69 IPR001005 -
Prci13g0324 85 SUPERFAMILY Homeodomain-like 31 75 IPR009057 -
Prci13g0324 85 CDD SANT 29 69 IPR001005 -
Prci13g0324 85 SMART sant 26 75 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0324 Prci-Chr13 2240666 2242672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0324 29 69 MYB Transcription Factor Family AT1G22640 53.659 5.60e-10 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0324 Myb_DNA-binding 4.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0324 K09422 - qsu:112022944 118.627