Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0323 ATGGACAAACAACGTACAAGGCAACGCAAGACTACTAATACCTCTGACTCTGAAGAGGTGAGCAGTGTGGAGTGGGAGTTCATAAACATGTCGGAGGAAGAAGAAAATCTCATCCACAGAATGTACAGCCTCGTTGGAGACAGATGGAGTCTGATAGCAGGTAGGATTCCAGGTCGGAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAAGTGTTCGCTACCAGAAGAGAAAAACTTAATTAG 255 0.4431 MDKQRTRQRKTTNTSDSEEVSSVEWEFINMSEEEENLIHRMYSLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQVFATRREKLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0323 84 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g0323 84 Gene3D - 30 83 - -
Prci13g0323 84 FunFam MYB-like transcription factor 29 71 - -
Prci13g0323 84 SMART sant 26 74 IPR001005 -
Prci13g0323 84 SUPERFAMILY Homeodomain-like 31 74 IPR009057 -
Prci13g0323 84 CDD SANT 29 68 IPR001005 -
Prci13g0323 84 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 29 72 - -
Prci13g0323 84 Pfam Myb-like DNA-binding domain 30 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0323 Prci-Chr13 2240666 2242672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0323 29 82 MYB Transcription Factor Family AT5G14750 40.741 1.08e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0323 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0323 K09422 - qsu:112022944 123.25