Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0291 ATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCACAATCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGCAGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA 1134 0.4568 MPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTAGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0291 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 234 297 IPR004827 GO:0003700|GO:0006355
Prci13g0291 377 MobiDBLite consensus disorder prediction 203 225 - -
Prci13g0291 377 MobiDBLite consensus disorder prediction 328 377 - -
Prci13g0291 377 Pfam Disordered region downstream of MFMR 82 210 - -
Prci13g0291 377 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 354 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci13g0291 377 SMART brlzneu 232 296 IPR004827 GO:0003700|GO:0006355
Prci13g0291 377 Gene3D - 235 288 - -
Prci13g0291 377 Pfam bZIP transcription factor 232 294 IPR004827 GO:0003700|GO:0006355
Prci13g0291 377 Coils Coil 252 307 - -
Prci13g0291 377 MobiDBLite consensus disorder prediction 68 83 - -
Prci13g0291 377 CDD bZIP_plant_GBF1 237 285 IPR045314 GO:0003700|GO:0006355
Prci13g0291 377 MobiDBLite consensus disorder prediction 48 83 - -
Prci13g0291 377 MobiDBLite consensus disorder prediction 340 356 - -
Prci13g0291 377 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 239 254 IPR004827 GO:0003700|GO:0006355
Prci13g0291 377 MobiDBLite consensus disorder prediction 230 267 - -
Prci13g0291 377 SUPERFAMILY Leucine zipper domain 235 291 IPR046347 GO:0003700|GO:0006355
Prci13g0291 377 MobiDBLite consensus disorder prediction 203 271 - -
Prci13g0291 377 MobiDBLite consensus disorder prediction 117 137 - -
Prci13g0291 377 Pfam G-box binding protein MFMR 1 49 IPR012900 -
Prci13g0291 377 MobiDBLite consensus disorder prediction 99 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0291 Prci-Chr13 1940063 1943664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0291 1 377 bZIP Transcription Factor Family AT2G46270 50.660 4.29e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g0291 MFMR_assoc 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0291 K09060 - gmx:778133 532.717