Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0290 ATGGGAAACAGTGAGGAAGGGAAGTCTGCTAAAGTTGAAAAGCCCTCTTCACCAGTGACAACGGATCAGGCCAACCAGATCAACCCGACCAATATTCATCTGTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCACAATCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA 1281 0.4621 MGNSEEGKSAKVEKPSSPVTTDQANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0290 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Prci13g0290 426 MobiDBLite consensus disorder prediction 149 214 - -
Prci13g0290 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Prci13g0290 426 MobiDBLite consensus disorder prediction 100 133 - -
Prci13g0290 426 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Prci13g0290 426 MobiDBLite consensus disorder prediction 167 187 - -
Prci13g0290 426 MobiDBLite consensus disorder prediction 380 426 - -
Prci13g0290 426 Pfam Disordered region downstream of MFMR 132 259 - -
Prci13g0290 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 403 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci13g0290 426 MobiDBLite consensus disorder prediction 283 313 - -
Prci13g0290 426 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g0290 426 Coils Coil 301 356 - -
Prci13g0290 426 Gene3D - 284 338 - -
Prci13g0290 426 MobiDBLite consensus disorder prediction 389 405 - -
Prci13g0290 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Prci13g0290 426 MobiDBLite consensus disorder prediction 118 133 - -
Prci13g0290 426 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
Prci13g0290 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Prci13g0290 426 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0290 Prci-Chr13 1937940 1943664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0290 1 426 bZIP Transcription Factor Family AT2G46270 51.395 5.34e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g0290 MFMR_assoc 6.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0290 K09060 - gmx:778133 626.32