Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0289 ATGGGAAACAGTGAGGAAGGGAAGTCTGCTAAAGTTGAAAAGCCCTCTTCACCAGTGACAACGGCCAACCAGATCAACCCGACCAATATTCATCTGTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCACAATCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA 1275 0.462 MGNSEEGKSAKVEKPSSPVTTANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0289 424 MobiDBLite consensus disorder prediction 99 131 - -
Prci13g0289 424 Coils Coil 299 354 - -
Prci13g0289 424 MobiDBLite consensus disorder prediction 116 131 - -
Prci13g0289 424 MobiDBLite consensus disorder prediction 387 403 - -
Prci13g0289 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Prci13g0289 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Prci13g0289 424 MobiDBLite consensus disorder prediction 279 311 - -
Prci13g0289 424 Pfam Disordered region downstream of MFMR 130 257 - -
Prci13g0289 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Prci13g0289 424 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g0289 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 401 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci13g0289 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Prci13g0289 424 Gene3D - 282 336 - -
Prci13g0289 424 MobiDBLite consensus disorder prediction 375 424 - -
Prci13g0289 424 MobiDBLite consensus disorder prediction 165 185 - -
Prci13g0289 424 MobiDBLite consensus disorder prediction 147 215 - -
Prci13g0289 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Prci13g0289 424 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Prci13g0289 424 SUPERFAMILY Leucine zipper domain 282 338 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0289 Prci-Chr13 1937939 1943664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0289 1 424 bZIP Transcription Factor Family AT2G46270 51.636 2.43e-126 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g0289 MFMR_assoc 6.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0289 K09060 - gmx:778133 617.076